| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2052 |
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| Symbol | |
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| ID | 3835478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 2374586 |
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| End bp | 2376085 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637826153 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_427139 |
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| Protein GI | 83593387 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCGTA ACTCTCTTTC GCAGCGGACC CCGATCATGC GCTCCTCCTT GATGTCTTGC
GTTGCCGTTC TGGCGCTGCT CGGGGGATGC TCGTTCATCC CCGATTACCA GCGGCCGGCG
GCGCCGGTTC CCACCGCCTG GCCCGATGGT CCGGCCTATG ACCAGGCCCA GGCCGGGGGC
GAGACCATCG CCACCCTCGG CTGGCGGGAG TTCTTCCGCG ACCCGGCGCT CCAGCGCCTG
ATCGCCCAGG CCCTGGAGCA TAATCGCGAC CTGCGCTCGG CCGCCCTGAC GGTGGAAAGC
GCCCGGGCCA CCTATCGTAT CGAACGGGCC GATCTGCTGC CCACCGTCAA CGGCGGCACC
GACCTAACCC ACCAACGCAC GCCGCGCACG GCCACCCAGA CCGGCAAGGC CCAGACGACG
ACCAATTACT CGGCCAATAT CGGCACCACG TCCTATGAGA TCGATTTCTT TGGCCGTATC
CGCAGCCTGG AGGAAGAGGC GCTCGAGCAA TATTTCGCCA CCGAGGAGGC CCGGCGAAGC
GTTCAGATCG CCTTGATCGC CGAGGTTGCC AACGCCTATA TCACCCTGCT GGCCGACCGA
ACCTTGTTGC AGCTCACCGA AGAGACCCTG AACACCCGCA TCGAATCCTT CAATCTGACC
CAGCAAAGCT TCGATCGCGG CGTCGGCACC CGCCTGGATG TCACCCAGGC CCAGACCACG
GTGGAAACCG CCCGGGCCAA CCGCGCCATC TATACCCGCT ATGTCGCCCA GGATATCAAC
GCCCTGCGCC TGCTGGTCGG CGATCAGCTT GATGCGAACC TGCTGGCCGG CACGCCGCCG
CTCGATCTTG GGCGGTTTTT CCCCAATGTT CCCGCCGGTC TGCCCTCGGA CCTGCTGCTG
CGCCGGCCCG ATATCCTGGA AGCCGAGCAC AAGCTGGTGG CGGCCAACGC CAATATCGGC
GCGGCGCGGG CGGCCTTCTG GCCGAAGATC TCGCTGACGG GCAATCTGGG AACGGCCAGC
GCCTCGCTCG GCGATCTGTT TAGCAGCGGC TCCCTGGCCT GGAGCGTCGG CCCCTCGCTC
AGCGTGCCGC TGTTTGATTT CTGGCGCAAC GAGGCGACCT TGGAAAGCGC CAAGGTCCAG
CGTGAAATCG CCGTCGCCGC CTACGAGAAA TCGATCCAGA CCGCCTTCCG CGAAGTCGCC
GACGCCCTGG CGGCCAAGGG AACCCTGGGC GATCAGTTGC GCGCCCAGCA AGATCTGGTC
GCCGCCACCC AGGAAAGCTA CGCCCTGTCG CGCAACCGCT ATGACCAGGG CATCGACAAT
TACCTCTCGA CCCTGGATTC CCAGCGCTCG CTCTATGCGG CCCAGCAAGA TCTGATCAGC
GTGCGGGCCA ACCAGCTCAC CAATTACATC ACCCTCTATA AGGTGCTGGG CGGCGGCAGC
TTCGCCACTT CGCCCTCCGA ACTGCCCAAT CCGGCGGCCA GCGTCAGCAC CTTTCCCTAA
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| Protein sequence | MPRNSLSQRT PIMRSSLMSC VAVLALLGGC SFIPDYQRPA APVPTAWPDG PAYDQAQAGG
ETIATLGWRE FFRDPALQRL IAQALEHNRD LRSAALTVES ARATYRIERA DLLPTVNGGT
DLTHQRTPRT ATQTGKAQTT TNYSANIGTT SYEIDFFGRI RSLEEEALEQ YFATEEARRS
VQIALIAEVA NAYITLLADR TLLQLTEETL NTRIESFNLT QQSFDRGVGT RLDVTQAQTT
VETARANRAI YTRYVAQDIN ALRLLVGDQL DANLLAGTPP LDLGRFFPNV PAGLPSDLLL
RRPDILEAEH KLVAANANIG AARAAFWPKI SLTGNLGTAS ASLGDLFSSG SLAWSVGPSL
SVPLFDFWRN EATLESAKVQ REIAVAAYEK SIQTAFREVA DALAAKGTLG DQLRAQQDLV
AATQESYALS RNRYDQGIDN YLSTLDSQRS LYAAQQDLIS VRANQLTNYI TLYKVLGGGS
FATSPSELPN PAASVSTFP
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