| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2051 |
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| Symbol | |
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| ID | 3835477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 2371444 |
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| End bp | 2374596 |
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| Gene Length | 3153 bp |
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| Protein Length | 1050 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637826152 |
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| Product | hydrophobe/amphiphile efflux-1 HAE1 |
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| Protein accession | YP_427138 |
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| Protein GI | 83593386 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.625984 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAGTT TCTTTATCGA TCGCCCCGTC TTCGCATGGG TCATCGCCAT CATCATCATG
CTCTCCGGGG CGCTCTCCAT CCTCTTTCTG CCCATCGAGC AGTATCCGAC GGTGGCGCCG
CCCTCGGTGC GCATCAACGC CACCTATCCC GGCGCCTCGG CCCAAACTCT GGAAAATACG
GTCACCCAGG TGATCGAACA GCAGATGAAC GGCCTTGATA ATCTGCGCTA TATCTCCTCG
ACCAGCGATT CCTCGGGTTC GGCCACCATC ACTCTGACCT TCAACCCCGA GGCCAATCCC
GACATCGCCC AGGTTCAGGT CCAGAACAAG CTCCAGCTCG CCACCCCGCT TCTGCCCCAG
GAGGTGCAGC AGCAGGGCAT CCAGGTGACC AAGGCCAACA ACACCTTCCT GATGGTCGTC
GGCTTCATCT CCAAGGACGG CTCGCTGACC GAATCCGGCA TCGCCGACTT CGTTTCCAGC
AACATCAAGG ATCCGCTGAG CCGGACCAAC GGCGTGGGCG AAGTGACGGT CTTTGGATCC
CAGCACGCCA TGCGCATCTG GCTTGATCCC GACAAGCTGA TCAGCTTCGG CCTGACGACG
ACCGAGGTTA AAAGCGCGAT CACCGCCCAG AACGCCGAGG TTTCCGCCGG CCAGATCGGC
GGCGCCCCCT CCGTACCCGG CCAAGAGCTC AACGCCACCA TCGTCGCCCA GACCCGCCTG
GAAACCGTGG AAGAGTTCGG CGCCATTCTG ATCCGGGTCA ACGCCGACGG CTCGCAGATC
CGGCTGCGCG ATATCGCGCG CATCGAGATC GGCGCCGAAA GCTACGGCAC CATGGCCCGC
TACAACGGCC AGCCGGCCAG CGGCATCGGC GTCAGTTTGG CGACCGGCGG CAACGCCCTT
GATACGGCCG ACGCCGTTCG CGCCACCATC GAACGCCTGC GGCCGATTTT CCCGCAAAGC
GTCGATGTCA TCTATCCCTA TGACACCACG CCCTTCGTCA AAATCTCGAT CGAGGAGGTG
GTGCGCACCC TGGGCGAGGC CATCATCCTG GTCTTCCTGG TGATGTATCT GTTCTTGCAG
AACATTCGCG CCACGCTGAT TCCGACGATC GCCGTGCCGG TGGTGCTGCT TGGCACCTTT
GGCATCATGG CGGCCTTTGG CTTCACCATT AACACCCTGA CCATGTTCGG CTTGGTGCTG
GCCATCGGCC TGCTTGTCGA CGACGCCATC GTCGTCGTCG AAAACGTCGA ACGCGTGATG
CACGAGGACA ATCTTTCGCC GCGCGATGCC ACGCGCAAAT CAATGAGGCA GATCACCGGC
GCCCTGGTCG GCATCGCCCT GGTGCTGTCG GCGGTGTTCG TGCCGATGGC TTTTTTCAGC
GGCTCGGTCG GCGCCATCTA CCGCCAGTTC TCGCTGACCG TCGCCTCGGC GATGCTGCTC
TCGGTGCTGG TCGCCGTCGT CCTCACCCCG GCGCTCTGCG CCACCTTCCT CAAGCCCAGC
CATGGCGATC CTTACGCCAA AAAAGGGTTC TTCGGCTGGT TCAACCGCGG CTTCGACCGC
ACCAATAGCT TCTATCAAAG CAGCGTCGGC CATGTTATCG GCCGCAAATG GCGCTACTTG
CTGATCTATG GACTGATCCT CGTCGGCTTG GGCCTGTTGT TCGTGCGCCT GCCCTCGTCG
TTCCTGCCCA ACGAGGACCA GGGCATTTTG TTCGCCCAGG CCTCGCTTCC CGCCGGCGCC
ACCCAGGAGC GCACCCAGGA GGTGCTCGAC CAGATGTCGC GCCACTTCCG CGAATCCGAG
GCGGATTTCG TCGAAGGGGT GTTCACCGTC AACGGCTTCA GCTTCTCCGG CCGTGGCCAG
AACAGCGGCC TCGCCTTCGT GCGCATGAAG AACTGGGACG ATCGCGATCC CGACAAGGGC
TCGGTCTTCG CCGTCGCCAG ACGGGCGATG GGCGCCTTGT CACGGATCAA GGAGGCGCGG
ATCTTCGCCT TCGCCCCGCC GGCGATCATC GCCCTTGGCA ACGCCTCGGG CTTCGAGTTC
CAGTTGCTTG ACCGCGCCGG TCAGGGCCAC GAAAAACTGA TGGCGGCGCG CAACCAGTTG
CTGGGCATGG CGGCCAAGAA CCCGGCGCTG ATGGCGGTGC GTCCCGACGG GCTGGAAGAC
AATCCCCAGC TCAAGATCGA TATCGACCAG GAAAAGGCCA GCGCCCTTCA GCTGTCGCTG
TCCGATATCA ATTCCACCCT GACCACCACC TGGGGCTCGT CCTACGTCAA CGACTTCATC
GAAAATGGCC GGGTGAAGAA GGTCTATCTG ATGGCCGACG CCCCCTTCCG CATGCAGGCC
GCCGACCTTG ATCGCTGGTA TGTGCGCAAC AGCCAGGGTG AAATGGTGCC GTTCTCGGCC
TTCACCGATG TTCACTGGAT CTATGGTTCG CCCCGCCTGG AACGCTACAA CGGCCAATCC
TCGCGCAAGA TCGCCGGTCA GCCGGCCCCG GGGATGAGCA CCGGCGCGGC GATGGCCGAA
ATGGAGGCGA TGGCGGCCAA GCTGCCGCCG GGCTTCGGCT ATGAATGGAC GGGGTTGTCC
TATGAGGAGC GGCTGTCGGG TTCGCAGGCT CCGGCGCTCT ACGCCTTGTC GATCATCGTC
GTCTTCCTCT GTCTGGCCGC CCTTTACGAA AGCTGGGCCA TTCCCTTCGC CGTCATCTTG
GTGGTGCCGC TCGGCATTCT GGGCGCCGTC ATCGCCACCT CGGCGCGCGG CCTGTCCAAC
GACGTGTTCT TCCAGATCGG TCTGTTGACG ACCATGGGCC TCGCCGCCAA GAACGCCATT
CTGATCGTTG AATTCGCCAA GGAGCTTTAC GAGGGGGGGA TGGATCTGCT CGAGGCCACG
GTCCATGCCG CCCGCCAGCG CCTGCGGCCG ATCATCATGA CCTCGATGGC CTTCAGCCTG
GGCGTGCTGC CCTTGGCGAT TGCCAATGGC GCGGGGTCGG GCAGCCAGAA CGCCATCGGA
ACCGGCGTGT TGGGGGGCAT GATCAGCGCT ACCGTCCTGG CCATTTTCTT CGTACCCTTG
TTCTTCATCC TGATCTTGCG CGCCTTCACC AAAAAGACCC CATCGACGCC CCCCGCGCCC
CCCTCCCCCG GAGCCGCCGC CGATGCCCCG TAA
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| Protein sequence | MASFFIDRPV FAWVIAIIIM LSGALSILFL PIEQYPTVAP PSVRINATYP GASAQTLENT
VTQVIEQQMN GLDNLRYISS TSDSSGSATI TLTFNPEANP DIAQVQVQNK LQLATPLLPQ
EVQQQGIQVT KANNTFLMVV GFISKDGSLT ESGIADFVSS NIKDPLSRTN GVGEVTVFGS
QHAMRIWLDP DKLISFGLTT TEVKSAITAQ NAEVSAGQIG GAPSVPGQEL NATIVAQTRL
ETVEEFGAIL IRVNADGSQI RLRDIARIEI GAESYGTMAR YNGQPASGIG VSLATGGNAL
DTADAVRATI ERLRPIFPQS VDVIYPYDTT PFVKISIEEV VRTLGEAIIL VFLVMYLFLQ
NIRATLIPTI AVPVVLLGTF GIMAAFGFTI NTLTMFGLVL AIGLLVDDAI VVVENVERVM
HEDNLSPRDA TRKSMRQITG ALVGIALVLS AVFVPMAFFS GSVGAIYRQF SLTVASAMLL
SVLVAVVLTP ALCATFLKPS HGDPYAKKGF FGWFNRGFDR TNSFYQSSVG HVIGRKWRYL
LIYGLILVGL GLLFVRLPSS FLPNEDQGIL FAQASLPAGA TQERTQEVLD QMSRHFRESE
ADFVEGVFTV NGFSFSGRGQ NSGLAFVRMK NWDDRDPDKG SVFAVARRAM GALSRIKEAR
IFAFAPPAII ALGNASGFEF QLLDRAGQGH EKLMAARNQL LGMAAKNPAL MAVRPDGLED
NPQLKIDIDQ EKASALQLSL SDINSTLTTT WGSSYVNDFI ENGRVKKVYL MADAPFRMQA
ADLDRWYVRN SQGEMVPFSA FTDVHWIYGS PRLERYNGQS SRKIAGQPAP GMSTGAAMAE
MEAMAAKLPP GFGYEWTGLS YEERLSGSQA PALYALSIIV VFLCLAALYE SWAIPFAVIL
VVPLGILGAV IATSARGLSN DVFFQIGLLT TMGLAAKNAI LIVEFAKELY EGGMDLLEAT
VHAARQRLRP IIMTSMAFSL GVLPLAIANG AGSGSQNAIG TGVLGGMISA TVLAIFFVPL
FFILILRAFT KKTPSTPPAP PSPGAAADAP
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