| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1995 |
|---|
| Symbol | |
|---|
| ID | 3835419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 2304404 |
|---|
| End bp | 2305834 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637826094 |
|---|
| Product | divalent cation transporter |
|---|
| Protein accession | YP_427082 |
|---|
| Protein GI | 83593330 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2239] Mg/Co/Ni transporter MgtE (contains CBS domain) |
|---|
| TIGRFAM ID | [TIGR00400] Mg2+ transporter (mgtE) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGAC TTGGCGATCG GGAAAAGACG GGCGATCGGG ACAAGACGCA AGACGACGCC
GCCCCGGCCG AGGATGGCTT CGGCCTGTCG CGCGACCAGA TCGAGGCGGT TCGCGCCGCC
CTGGATGACG AGGAGGCGGC ACGCGGGGCC GAGACGGCGC GCGCCCTGGT GCTGCGCCTC
CACTACGCCG ATCAGGCCGA CCTTGTCCAA AGCCTGCCCG CCGAGGATCG CCGGGCGCTG
ATCGGCGCGC TCAAGGGCGC CTTCGACCCC GAAATCCTGC CCGAGCTCGA TGACTACGTC
CGCGACGAGG TGATCGAGAC CCTGGGCTAT CAGGATCTGG CCCAGGCCCT GGCCGAGCTT
GATTCCGATG ACGCCTTGTA TGTCGTCGCC CAGCTTGACG AGGCCGAACA GGCCGCCGTC
CTCGAACGCC TGCCCGTGGC GACGCGGGCG CTGATCGAAC AGGGCCTGTC GCTGCCCGAG
TATTCCGCCG GGCGGCTGAT GCAGCGCGAG CTGGTGGCGG TTCCGGCCTA TTGGTCGGTC
GGCGAGACCC TGGACTACCT GCGCTCGGCC CCGCGCCTGC CCGAGGATTT CCACGAGATC
TATGTCGTCG ATCCGCGCCA CCGCCCGGTC GGGCAATTGC GCTTGTCGAC GCTGCTGCGC
AGCCAGCGTT CCATCCGCCT GCGCGACATC ATGGACGCCG AGATGCCGCC GCTGTCGACC
ACCGCCGATC AGGGGGAGGT GGCTCGGCTG TTTCGCGATC GCAACCTAAT GAGCGCCCCG
GTGATTGACG TCTCGGGCCG TCTGGTCGGG CGGATCACCG TCGATGACGT TCTTGACGTG
ATCGAGGAGG AGGCCGAGGA CGACATGCTG CGCCTGGCTG GCGTCGCCGA GGTCGACCTC
TATCGCGCCG TCGTCGATAC GGTGAAGGCG CGGGCCTCGT GGCTGGGGGT CAATCTGATC
ACCGCCATTC TCGCCTCTCT GGTGATCGGC CTGTTCGAGG CGACCTTGCA ATCGATCGTC
GCCCTGGCCG TTCTGATGCC GATCGTCGCC TCGATGGGCG GCAATGCCGG CACCCAGGCG
CTGACCGTCG CCGTGCGCTC GCTGGCCACC AAGGAACTGA CGCCATCGAA CGCCTGGCGG
ATCATCGGCA AGGAATTTCT GGTCGGCATC CTCAACGGCG TCGTTTTCGC CGTGCTGATC
GGGGCGATCG CCTGGATCTG GTTCGATCGC CCGGAAATCG GCTTGATCAT CGCCGCGGCG
ATGGTCATCA ATCTGGCGGT GGCCGGCCTG TCGGGCATCG TCATTCCCCT GGCCCTGGAG
CGCATGCGGA TCGATCCCGC CATCGCCTCG GCGGTTTTCC TGACGACGAT CACCGATGTG
GTCGGTTTTT TCGCCTTCCT CGGACTGGCC TCGCTGTTCC TGATGCCCTG A
|
|---|
| Protein sequence | MAGLGDREKT GDRDKTQDDA APAEDGFGLS RDQIEAVRAA LDDEEAARGA ETARALVLRL
HYADQADLVQ SLPAEDRRAL IGALKGAFDP EILPELDDYV RDEVIETLGY QDLAQALAEL
DSDDALYVVA QLDEAEQAAV LERLPVATRA LIEQGLSLPE YSAGRLMQRE LVAVPAYWSV
GETLDYLRSA PRLPEDFHEI YVVDPRHRPV GQLRLSTLLR SQRSIRLRDI MDAEMPPLST
TADQGEVARL FRDRNLMSAP VIDVSGRLVG RITVDDVLDV IEEEAEDDML RLAGVAEVDL
YRAVVDTVKA RASWLGVNLI TAILASLVIG LFEATLQSIV ALAVLMPIVA SMGGNAGTQA
LTVAVRSLAT KELTPSNAWR IIGKEFLVGI LNGVVFAVLI GAIAWIWFDR PEIGLIIAAA
MVINLAVAGL SGIVIPLALE RMRIDPAIAS AVFLTTITDV VGFFAFLGLA SLFLMP
|
|---|
| |