Gene Rru_A1978 details

Gene Information

• Locus tag: Rru_A1978
• ID: 3835402
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: -
• Start bp: 2288020
• End bp: 2289882
• Gene Length: 1863 bp
• Protein Length: 620 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637826077
• Product: indolepyruvate ferredoxin oxidoreductase
• Protein accession: YP_427065
• Protein GI: 83593313
• COG category: [C] Energy production and conversion
• COG ID: [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
• TIGRFAM ID: [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCGTGA CCGTTCTCAA CCGGGTTCTT GCCGGAACCC GCCCGCTGAT GTCGGGCAAT 
GAGGCCGTTG CCCGCGCCGT CTGGGAATCC GGCGCCGCGC TCGCTTCGGC CTATCCCGGC 
ACGCCATCGA CCGAGATTCT CGAATCCCTG GCCCTGTACC CCGATATCGT CGCCCAATGG 
GGCGTCAACG AGAAGGTGGC GCTAGAAACC GCCATCGGCG CCTCGCTGAC CGGGGCGCGG 
GCCTTCTGCG CCATGAAGCA CGTCGGCCTC AACGTCGCCG CCGACGCCTT GATGAGTCAG 
GCCCTGGCCG GGATCCATGG CGGGCTGGTG ATCGCCGTCG CCGATGATGT CGGGCTGTCG 
TCAAGCCAGA ACGAGCAAGA CAGCCGCTAT TGGGGGCGCT TCGCCCATCT GCCGGTGCTC 
GAACCCGCCG ACGCCCAGGA GGCCTATGCC TTCACCCTGG CGGCCTTCGC CCTATCGGAG 
CGCTTCCACA CCCTGGTCAT CCTGCGCCTG ACCACCCGGG TCTGCCACGT CAAGGCCCTG 
GTCGCCACCG GCGAGCGCCA ACCCCACGCC AGCTTAGGCT TCGCCCGCGA TCCCAAGCGC 
TGGGTGATGC TGCCCGCCCA TGTGCGGGGG ATGATCCCGG TGCAGATCGC CCGCGACGCC 
GCCCTGGCCG CGCATGCCGA GGAAAGCCCG CTGCTCTGCG AGCTCGAAGG CGATGATCCC 
AGCATCGGCA TCATCGCCAG CGGTCCGGCG GCGCTGTCGG CGCGCGAGGC CTTTCCCGAG 
GCGCCGCTGC TCAAGCTTGG CCTTGGCTAT CCTTTGCCCA TCGAGCGCAT CCGCGCCTTC 
GCCGCTGGCG TTGGCAGGCT TCTGGTGGTT GAAGAGACCG AGCCGCTGGT GGAAACCGAA 
CTGCGCGCCC AGGGCATCGC CGTCACCGGC AAGGATCTGC TGCCGCGCTA TGGCGAGCTG 
TCGGTGGCCG TGCTGCGCGG CGCCCGGGCC CGCTTGCGCG GCGAGGCGGC GCCGGCGGTG 
GCGGCGCCCA TTGATGTGTT TCCCCGGCCG CCGACCATGT GTCCGGGCTG TCCCCATCTG 
GCGCCGTTCT ATTGCCTGTC GCGCTTACGC GGGTCGCTGC TGATCAGCGG CGATATCGGC 
TGCTACACCC TGGGCGCCGG CCAGCCCTGG CAGGCGATGG ACGCCTGCAC CTGCATGGGC 
GCCTCGCTGA CCCTGGCCAA TGGCATGGCG GTGGCCAAAA CCGGTGACGA CGCCGAGAAG 
GCGGTGGTCG CGGTGATCGG CGATTCCACC TTCTTGCACA TGGGCATGCA GGGCCTGCTC 
AATCTTGTCT ACAACCGGGC CAATGTCACC GTTCTGCTGC TCGATAACCG CACGGTGGGG 
ATGACCGGCG GCCAGGAGCA TCCGGGCACC GGCTTTGATA TCCACGGCGA TCCGGCGCCC 
CGCGTCGATT TCGTCGCCCT GGTCCAGGCG CTGGGGGTCA AGGCCGAGCG GGTTCACAGC 
GTCGATCCCT ATGACCTGCC CGGTTTGTTC AAGCTGATCC GCAGCGAGAC GGCGGTCAAT 
GATGTCTCGG TGATCCTGAC CAACCGTCCC TGCGTGTTGA CCGATCGCCA CCATTCGCGC 
CCGGCCCTGG GCGTGGTCGA AGCCGAGTGT ACCGGCTGCG GCGGATGCCT GCAGGTCGGC 
TGTCCGGCGA TCCAGGTGGT GCGCCGCGAT CGCGTGATGA CGCCAAGCGG TCGGGAAAAG 
GAGCGGGCTT TCGTCACCAT CGACAGCGCC TTTTGCACCG GCTGCAACGC CTGCGTCGGG 
CTGTGCGCGC CCAAATGCAT CCAGCCGCTG GCGGCGATGT CTGAACGCTG CGAAGGGGTC 
TGA 

 

Protein sequence

MPVTVLNRVL AGTRPLMSGN EAVARAVWES GAALASAYPG TPSTEILESL ALYPDIVAQW 
GVNEKVALET AIGASLTGAR AFCAMKHVGL NVAADALMSQ ALAGIHGGLV IAVADDVGLS 
SSQNEQDSRY WGRFAHLPVL EPADAQEAYA FTLAAFALSE RFHTLVILRL TTRVCHVKAL 
VATGERQPHA SLGFARDPKR WVMLPAHVRG MIPVQIARDA ALAAHAEESP LLCELEGDDP 
SIGIIASGPA ALSAREAFPE APLLKLGLGY PLPIERIRAF AAGVGRLLVV EETEPLVETE 
LRAQGIAVTG KDLLPRYGEL SVAVLRGARA RLRGEAAPAV AAPIDVFPRP PTMCPGCPHL 
APFYCLSRLR GSLLISGDIG CYTLGAGQPW QAMDACTCMG ASLTLANGMA VAKTGDDAEK 
AVVAVIGDST FLHMGMQGLL NLVYNRANVT VLLLDNRTVG MTGGQEHPGT GFDIHGDPAP 
RVDFVALVQA LGVKAERVHS VDPYDLPGLF KLIRSETAVN DVSVILTNRP CVLTDRHHSR 
PALGVVEAEC TGCGGCLQVG CPAIQVVRRD RVMTPSGREK ERAFVTIDSA FCTGCNACVG 
LCAPKCIQPL AAMSERCEGV