Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1945 |
Symbol | |
ID | 3835369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 2253749 |
End bp | 2254432 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637826044 |
Product | Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_427032 |
Protein GI | 83593280 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGACCA TTCTTATCTC CGGGGCCAAT CGTGGCCTGG GCCTGGAATT CGCCCGGCAG TATCGCCAGG AAGGGCATCG GGTGATCGGC ACCTGCCGCG ATCCCGGCAA GGCTGGCGAT CTTCTGGCCC TTGGCGCCGA GGTCCTGCCC CTTGACGTGG CCGATCTGGC CGCCGTCGCC GGCTTCGGCG CGGTGGTGGG GGACCAGCCC GTCGATCTGT TCATCAACAA TGCCGGCGTT TATGGCGGAC GCCACAGCGA ACAGGATCTG GGCGAGGTCG ACAGCCGCGT TTGGCTTGAA ACCCTGGTGG TCAATACCAT CGCTCCGCTC AAGCTGACCG AGGCGATCTT GCCCAATCTC GAGCGGGCCG AGGCGGCGAA GGCCGTCTAT CTGTCCTCGA AGATGGGGTC GATGGCGGCC AATAGCGCCG GCGGCGCCTA TATCTACCGC TCGTCCAAAG CCGCCCTGAA TGCCGTGGTC CGCAGCCTCG CCGCCGATCT GGCCGATCGC GCCATCGTCG TCGCCGCCCT CCATCCGGGC TGGGTGCGCA CCGATATGGG CGGTCCCGAT GGCGACATCG ACGCCGGGGA GTCGATCGCC GGCCTGCGCC GGGTGATCGC CGCCCTGGCC ACCACCGATA GCGGCCGCTT CCTGGCCTAT GACGGTGGCG AGGTGCCCTG GTAG
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Protein sequence | MSTILISGAN RGLGLEFARQ YRQEGHRVIG TCRDPGKAGD LLALGAEVLP LDVADLAAVA GFGAVVGDQP VDLFINNAGV YGGRHSEQDL GEVDSRVWLE TLVVNTIAPL KLTEAILPNL ERAEAAKAVY LSSKMGSMAA NSAGGAYIYR SSKAALNAVV RSLAADLADR AIVVAALHPG WVRTDMGGPD GDIDAGESIA GLRRVIAALA TTDSGRFLAY DGGEVPW
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