| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1897 |
|---|
| Symbol | |
|---|
| ID | 3835321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 2198767 |
|---|
| End bp | 2199558 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637825996 |
|---|
| Product | indole-3-glycerol phosphate synthase |
|---|
| Protein accession | YP_426984 |
|---|
| Protein GI | 83593232 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.995297 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGACA TTCTGCGCGA GATCTGCGAC ACCACCCGCG CCGAGGTGGC GCGGCGCAAG
GCCGCCCTGC CCTTAGCCGA TGTGACGGCG CGGGCGGAAG ACGCCAACGC GCCGCGCGGC
TTCGCCAACG CCCTGACCCG CACCGCCGAC AGCGGTCGGC CGGCGTTGAT CGCCGAAATC
AAAAAGGCCT CGCCCTCGGC CGGGTTGATC CGCCCCGATT TCAACCCCGC CGTCCTGGCA
CGCGCCTATC ACGCCGCCGG GGCGACCTGC CTGTCGGTGC TGACCGATGG ACCCTATTTC
CAAGGGCACG CCGATTTCCT GATCGCCGCC CGCGCCGCCG TTCCCCTGCC GGTGCTGCGC
AAGGATTTCA TGGTCGATCC CTGGCAGGTG GTCGAGGCCC GGGCGATGGG GGCCGATTGC
ATCCTGGTCA TCCTGGCCGC CCTTGACGAC GGCGCCGCCG CCGAGATCGA AGCCTGCGCC
CATGACTGGG GCATGGACGT GCTGGCCGAG GTCCATAACG AAGAGGAATG CGCCCGCGCC
CTGACCTGCC TGACCACGCC GCTGCTCGGC GTCAACAACC GTAATCTGAA AACCCTGGTC
ACCGATCTGG CGGTGACCGA GCGTCTGGCC AAGATGGTGC CCGCCGACCG GGTGCTGGTC
GCCGAAAGCG GTCTGCGCAC CCGCAAGGAC CTCGACCGCA TGACCGCCGT CGGCGCCCGC
CGCTTCCTGA TCGGCGAACA TTTCATGCGC CAACCCGATG TCGGCGACGC CGTGCGCGCC
CTGATCGGCT GA
|
|---|
| Protein sequence | MSDILREICD TTRAEVARRK AALPLADVTA RAEDANAPRG FANALTRTAD SGRPALIAEI
KKASPSAGLI RPDFNPAVLA RAYHAAGATC LSVLTDGPYF QGHADFLIAA RAAVPLPVLR
KDFMVDPWQV VEARAMGADC ILVILAALDD GAAAEIEACA HDWGMDVLAE VHNEEECARA
LTCLTTPLLG VNNRNLKTLV TDLAVTERLA KMVPADRVLV AESGLRTRKD LDRMTAVGAR
RFLIGEHFMR QPDVGDAVRA LIG
|
|---|
| |