Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1875 |
Symbol | |
ID | 3835299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 2172205 |
End bp | 2173710 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637825974 |
Product | multi-sensor Signal transduction histidine kinase |
Protein accession | YP_426962 |
Protein GI | 83593210 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGTTCG CTCCACCCCG CGGCACCAAC GACCCCGAGG ATTTTCCCGG GGAAGGCAGC GATCCCCGGA CGCTCTTTCC CGCTCCGCTC TCGGCCCGGC TGGTTCTGCT CGGGGGCCTG TTCACCCTGT TCAGCACGGT GGCCATCACG CTTTGGCTGA TCGGACTGGC CGCCCGCTAC CCCGATCACG CCCTTTTGGC GCCGGTGGCC GGCGGCGGCG CGGTCATCGT CACCCTGACC GGGGTCTGCC TGATCGCCTT CCTTTTCCGC GAACGCCGCC ATCTCGCCGC CGAGCGCCGG CTGGCGCTCA GCGAGGCCCG GTTGCAGACG GCCCTGGAAA ACACCGGGGA CGGCATCTGG GATTGGCAGA TCCCCGGCGA TGTCGTTCAT CTCAACGGCG CGCTGATCGC CCGCCTGGGC TTTCCCGTCG ACACCCCCTC GCCCACCGCC ACCTGGGAAA CGATGATCCA TCCCGAGGAT CGCCCGGCCA CCCTTGCCGC CTTTCACGAC CATCTCGCCG GCAAAACCCC GAGCTATCAT GCGCGCTATC GCTGGAAGCT GCCCGATGGC GTGATGATCT GGGTAGAGGC CAAGGGCCGG GTCGTCACCC GCGACCGCTC GGGCAAGCCC TTGCGCATGA CCGGAACGCT GAGCGACGCC ACCCCTCAGG TCGAAGCCGA AGAGCTGATG CGCGAGAAAT CGCGGCGGCT CGAGGAGTCC AACCGCGATC TCGAACAATT CGCCTATGTG GCCTCCCACG ACCTGCAAGA GCCGCTGCGC ATGGTCTCGT CCTATCTGGG ACTGCTGCGC CGGCGCCACG GCGACCAGCT CGCCCCCGAG GCGCTGGAGT TCATGTCCTA TGCCGAAGAC GGCGCCAAGC GCATGTCACG GCTGATCCTC GACCTTTTGG AGTATTCGCG CGTCACCACC CGGGGGGAGC CCCCGGAAAC GGTCGCCCTG GCCGAGGTGA TCGACGAAGC GCGGTCCAAC CTGCGCATGA TCATCGACGA GACGGCGGCG CGGATCGACC TGCTGGGCTG CGATCGTACG GTTTTGGCCG ATCGCGGACA GGTGGTCCGC GTCTTTCAGA ATCTGATCGG CAATGCCCTG AAATACCGTT CGCCCGACCG GCCGCCGATA ATCACCCTGC GCTGTGGCGA AGACGAGGGG TGGGTCAACG TCAGCGTGGC CGATAACGGC ATCGGCTTCA GTCCCGAGCA CGCCGAACGG ATCTTCATCA TCTTCCAACG CCTGCATGGC CCAAAAGCCT ATGAGGGCAC CGGCATCGGC CTGTCCATCT GCAAACGCAT CATCGAGCGC CACGGCGGCA CCATCGAAGC CCAGGGAACC CCGGGCGAAG GGGCCCTCTT CCGCTTCACT TTGCCCCGCG CCCCCGGACC CTCCCGGTCG ACGGGCGGCG CCCCCGACAA CCAAGACCGT CGCCGCCGCG ACCAAGGCCG GGGCGCTGAC GGGAGGGGGC GCGATCAGGG CCGCTTGGCG CCGTAA
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Protein sequence | MLFAPPRGTN DPEDFPGEGS DPRTLFPAPL SARLVLLGGL FTLFSTVAIT LWLIGLAARY PDHALLAPVA GGGAVIVTLT GVCLIAFLFR ERRHLAAERR LALSEARLQT ALENTGDGIW DWQIPGDVVH LNGALIARLG FPVDTPSPTA TWETMIHPED RPATLAAFHD HLAGKTPSYH ARYRWKLPDG VMIWVEAKGR VVTRDRSGKP LRMTGTLSDA TPQVEAEELM REKSRRLEES NRDLEQFAYV ASHDLQEPLR MVSSYLGLLR RRHGDQLAPE ALEFMSYAED GAKRMSRLIL DLLEYSRVTT RGEPPETVAL AEVIDEARSN LRMIIDETAA RIDLLGCDRT VLADRGQVVR VFQNLIGNAL KYRSPDRPPI ITLRCGEDEG WVNVSVADNG IGFSPEHAER IFIIFQRLHG PKAYEGTGIG LSICKRIIER HGGTIEAQGT PGEGALFRFT LPRAPGPSRS TGGAPDNQDR RRRDQGRGAD GRGRDQGRLA P
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