| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1744 |
|---|
| Symbol | |
|---|
| ID | 3835166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 2034357 |
|---|
| End bp | 2037188 |
|---|
| Gene Length | 2832 bp |
|---|
| Protein Length | 943 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637825841 |
|---|
| Product | DNA gyrase subunit A |
|---|
| Protein accession | YP_426831 |
|---|
| Protein GI | 83593079 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
|---|
| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCACCA ATACGCCTAA ACCCATCGAC CTGGATATCT CGCCGGTCTC CATCGAAGAC
GAGATGAAGC GCAGCTATCT TGATTACGCG ATGAGCGTGA TCGTCAGCCG CGCCCTTCCC
GATGTCCGCG ACGGCTTGAA GCCCGTTCAT CGGCGCATCC TCTATTCGAT GAAGGAAAGC
GGCTACGAGT TCAACAAGCC CTATCGCAAA TCGGCGCGCA TCGTCGGTGA CGTGATGGGT
AAATATCACC CCCACGGCGA CCAATCGATC TATGACGCCA TGGTCCGCAT GGTGCAGAAT
TTCGCCATGC GCCTGCCGCT GATCGATGGC CAGGGCAACT TCGGATCGAT GGACGGCGAC
CGCGCCGCGG CCATGCGATA CACCGAGGCC CGCATGGCCA AGGCCGCCCA CAGCCTGCTT
GACGATATCG ACAAGGAAAC CGTCGACTTC CAGCCCAACT ACGACGAAAC CACCCGCGAG
CCGATCGTTC TGCCGGCGCG CTTCCCCAAT CTGCTGGTCA ACGGCGCGGG CGGCATCGCC
GTGGGCATGG CGACCAACAT CCCGCCGCAT AATCTGGGCG AGGTGATCGA CGCCTGTTGC
GCCATGATCG ACAATCCCGC CGTCACCGCC GAGGAACTGC TTGAACTGGT TCCCGGGCCG
GACTTCCCGA CGGGGGGCAC CATCCTCGGG CGCTCGGGCG TGCGCGCCGC CCATCTGACC
GGGCGCGGCT CGGTCATCAT GCGCGGCCGC ACCCATTTCG AAGATATTTC GGGCGGCCGC
CAGGCCATCA TCGTCACCGA GGTTCCCTAC CAGGTCAACA AGGCCTCGAT GGTGGAGAAG
ATCGCCGAGC TGGTGCGCGA GAAGAAGCTT GAGGGCATCT CCGATATCCG CGACGAGTCC
GATCGTCGCG GCGTGCGGGT GGTGATCGAG GTCAAGCGCG ACGCCATGGC CGAGGTCGTG
CTCAACCAGC TGTTCCGCTA CACGCCGCTG CAGACCAGTT TCGGCGTCAA TATGCTGGCG
CTCAATGGCG GCAAGCCCGA ATTGCTGGCC TTGCGGCCGA TCATCGAGGC CTTCATCACC
TTCCGCGAGG AGGTGATCCG CCGCCGTACG ATTTTCGAGC TGGGCAAGGC GCGCGAGCGG
GCCCACACCC TGGTCGGTCT GGCCATCGCC GTGGCCAATC TCGATCCGGT GATCAAGCTG
ATCCGCGAGG CGCCCGATCC CCAGGCCGCC CGCGAAGGGC TGATGGCCCG CGACTGGCCG
GCCATGGATG TCGAGCCGCT GATCAAACTG ATCGACGAGC CGGGGCGGAT GGTGATCGAC
GGGGTTTATC GCCTGTCGGA GATCCAGGCC CGCGCCATCC TTGATCTGCG TCTGCATCGC
CTGACCGGCC TGGAGCGCGA CAAGCTCCAT GGCGAATTGA TCGAGATCGG CCAGCAGATC
GAGGAATACC TTCATATCCT GCGCTCGCGC GCCCGGCTGT TCGAGATCAT GCGCGCCGAG
CTGGTCGAGA TGAAGGAGGC CTATGCCACC CCCCGGCGGA CGACGCTGGA GGAGAACGAG
TTCGAGCATG ACATCGAGGA CCTGATCCAG CGCGAGGAGA TGGTCGTCAC CGTCACCAAC
ACCGGCTATA TCAAGCGGGT ACCGCTGACC ACCTATCGCG CCCAGCGCCG CGGCGGCCGG
GGGCGGGCGG GCATGTCGAT GCGCGACGAG GATTTCGTGA CGACGATCTT CGTCGTCAAT
ACCCACGCGC CGCTGCTGTT CTTCTCGTCG GACGGCATGG TTTACAAGAT GAAGGTCTAT
CGCCTGCCGC TGGGCACCCC CCAGGCGCGC GGCAAGGCCA TGGTCAACAT CATGCCGCTG
AACGAGGGCG AGCGGATCAC CACGGTGATG CCGCTGCCCG AGGACGAGGG GGCCTGGGAC
CAGCTCGACG TGATGTTCGC CACCGAAACC GGCAATGTCC GGCGCAACCG CTTGTCGGAC
TTCACCAATG TGATGTCCAA CGGCAAGATC GCCATGAAGC TGGACGAGGG CGACCATCTG
ATCGGGGTGG CGACCTGCAC CGACGAGCAG GACGTGCTGC TGACCACCAA TCTCGGCAAG
GCCATCCGCT TTGCCGTGGG CGACGTGCGG GTGTTCGCCG GACGGACCTC GACGGGCGTG
CGCGGCATCC GTCTGGCCGA GGACGACCGG GTTAACCGCC TGTCGATCCT GGGCCATGTC
GAGGCCTCGG CCGAGACCCG CGCCGCCTAT CTCAAACAGG CCAGCGCCCT GCGCCGGGCC
AGTGGCGAGA CCGAGGGCGA GGATGACAGC ACCCTGGACG CCGAACCCGG CGTTCTGTCG
GCCGAGGAGT TCGAGGATCT GCGCCAGCGC GAGGAATTCC TGCTGACCGT CACCTCGCGC
GGCTTTGGCA AACGCACCTC GGCCTATGAG TACCGGGTGA CCGGACGCGG CGGCCAGGGT
ATCGCCAATA TCGAGATGAG CGAGCGCAAC GGCACCGTGG TCGCCGCCTT CCCGATCGCC
AATGAGGATC AGGTGATGAT GATCACCGAC GGCGGGCAGT TGATCCGCAT GCCGGTGAAC
GACGTGCGCA TCGCCGGCCG CAAGACCCAG GGCGTGACCC TGTTCCGCCT GTCCGACGAC
GGCGAGCACG TGGTCTCGGT CGCCCGGCTT CCCGAAATGA ACGGCAATGG CGATGACGGC
GAAGGCGACG ACGAAACGCC TGACGAGTCC TTGGCCGAGG ATGCCAACGG GGGGAGGGAC
GAGAGCGGGG AAGCGTCCGG CCTCCCGCCC GCGGGCCAAT CCCCCGAACG GAACGGGGAT
GATGCCGACT GA
|
|---|
| Protein sequence | MSTNTPKPID LDISPVSIED EMKRSYLDYA MSVIVSRALP DVRDGLKPVH RRILYSMKES
GYEFNKPYRK SARIVGDVMG KYHPHGDQSI YDAMVRMVQN FAMRLPLIDG QGNFGSMDGD
RAAAMRYTEA RMAKAAHSLL DDIDKETVDF QPNYDETTRE PIVLPARFPN LLVNGAGGIA
VGMATNIPPH NLGEVIDACC AMIDNPAVTA EELLELVPGP DFPTGGTILG RSGVRAAHLT
GRGSVIMRGR THFEDISGGR QAIIVTEVPY QVNKASMVEK IAELVREKKL EGISDIRDES
DRRGVRVVIE VKRDAMAEVV LNQLFRYTPL QTSFGVNMLA LNGGKPELLA LRPIIEAFIT
FREEVIRRRT IFELGKARER AHTLVGLAIA VANLDPVIKL IREAPDPQAA REGLMARDWP
AMDVEPLIKL IDEPGRMVID GVYRLSEIQA RAILDLRLHR LTGLERDKLH GELIEIGQQI
EEYLHILRSR ARLFEIMRAE LVEMKEAYAT PRRTTLEENE FEHDIEDLIQ REEMVVTVTN
TGYIKRVPLT TYRAQRRGGR GRAGMSMRDE DFVTTIFVVN THAPLLFFSS DGMVYKMKVY
RLPLGTPQAR GKAMVNIMPL NEGERITTVM PLPEDEGAWD QLDVMFATET GNVRRNRLSD
FTNVMSNGKI AMKLDEGDHL IGVATCTDEQ DVLLTTNLGK AIRFAVGDVR VFAGRTSTGV
RGIRLAEDDR VNRLSILGHV EASAETRAAY LKQASALRRA SGETEGEDDS TLDAEPGVLS
AEEFEDLRQR EEFLLTVTSR GFGKRTSAYE YRVTGRGGQG IANIEMSERN GTVVAAFPIA
NEDQVMMITD GGQLIRMPVN DVRIAGRKTQ GVTLFRLSDD GEHVVSVARL PEMNGNGDDG
EGDDETPDES LAEDANGGRD ESGEASGLPP AGQSPERNGD DAD
|
|---|
| |