| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1726 |
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| Symbol | |
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| ID | 3835147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 2018784 |
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| End bp | 2022317 |
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| Gene Length | 3534 bp |
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| Protein Length | 1177 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637825822 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_426813 |
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| Protein GI | 83593061 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAACC TTCTTGAGTC CCTGGCGGTC GGCCGCCGAA TCGAAGCCGC CGGCCTGCCT
GAAGGCTTCG ATGCCCTGGT CTTGGGCGAG CTTGCCGCCC GCCCCGGGGT TCCGGCCGTT
TTGCATGTGG CGCGCGATGA CGTGCGGCTG GCCCGGCTGG CCGAAACGAT CGCCTTCTTC
CATCCCGCCG TCGAGATTCT GGAATTTCCC GCCTGGGATT GCGTGCCCTA TGACCGGGTC
TCGCCCAATG TGGAAATCGT CGCCCGCCGG CTTGAAACGC TGAGCCGCCT GAGCGAGGAG
CCGACGCGCC AGCCCGGCGG CCGGCTGGTG CTGACCACGG CTTCGGCGAT CTTGCAGCGC
GTTCCGCCGC GCCAGATCCT CGAGCGCGGA GTGTTCAGCG CCCGGGTCGG CGGCCGGCTT
GATCTTGGCA AGCTCCTTGA TCATCTGGCC CGCCATGGCT ATGGCCGCTC CGAGCAGGTG
ATGGAGCCCG GCGAATACGC CGTGCGCGGC GGCATCGTCG ATATCTTCCC CCCCGGCGCC
CCCGAACCTT TGCGCCTGGA TCTGTTTGGC GACGAGCTTG ATTCGCTGCG CAGCTTCGAT
CCGGTCAGCC AGCGCACCAC CGGCCAGCGC GACGCCCTGA TCTTGCGGCC GATGAGCGAG
GTGGTGCTCG ATAAGGAATC GATCAGCCGC TTCCGTTCGG GCTACCGCGA GCTGTTTGGC
ACGCCCTCGG CCGCCGATGC GCTCTATGAG GCGATCTCGG CCGGTCTGCC CTTCATGGGC
ATGGAGCATT GGCTGCCGCT GTTCCATGAG GGCATGGATA CGCTGTTCGC CTATGTGCCC
GACGGACCGG TCACCCTCGA CCCCGGCCTT GATGGCGCCT TGCGGTCGCG CCAGGACCAG
ATTTTCGAGT ATTTCGAAGC CCGCCGGCTG ATGGAAAGCG TTGGCGATGG CGCCAAGGCC
AGCGAAAAGC CCGGCGGCGG CATGATCTAT CACGCCCTGC CGCCGCCCCG GATGTTCCTG
GAGGAGGACG AATTCCTCCG CCATTGCGCG GGGCGGCCCG GCGCCGCCTT CAGTGCCTAT
GCCGCCCCCG ACGTGGCGAC CGAAAAGGGC GTTGTCGGCG ATTTCCTTGG CCGCCCGGGC
CATGAATTCG CCGATATCCG CGCCCGCGCC GGCGGCAATG TCTTCGACGC CCTGCGCGAT
CACGCCCAGG CCCTGCGCGC CGCGGGCAAG CGGGTTGTTC TGACGGCGGC GACGATGGGG
GCGCGCGAGC GCATGACCGG CGTGCTGCGC GAGCATGGCC TGAGCCCGAT CGTCACCGCC
GAAACCTGGG CCGAGGCGTT GGAGCGGGCC AAGAAGGCGA CGGTCGTTCT GACCTTGATC
CTTGACCGGG GCTTTGAAAC CCCTGATCTG GCGGTGATTT CCGAAGCCGA CGTGCTGGGG
GACCGCCTGT CGCGGCCGGT ACGCAAGAAG AAGCTGGGCG ATAAGTTCAT CCCCGATATC
TCGGCCCTGT CGGAAGGCGA TCTGGTGGTC CATGTCGACC ACGGCATCGG CCAATACGAG
GGCCTGGAAA CCCTGACCGC CGGCGGCGCC CCCCATGACT GCCTGCGCGT GGTCTATGCC
GACAACAACC GCCTCTATGT GCCCGTCGAG AATATCGAAG TCCTCAGCCG CTATGGCTCG
GAGCAGGCCG GGGTCCAGCT TGACAAGCTG GGCGGCGTCG CCTGGCAGGC GCGCAAGGCC
AAGCTCAAGC AGCGCATCCG CGATATGGCC GAACAGCTGA TCGGCGTCGC CGCCGCCCGC
CAGCTCAAGG TTGGCGAGGT CATCAGCCCG CCCGAGGGCC TGTATGACGA ATTCGCCGCC
CGCTTCCCCT ATGCCGAAAC CGACGATCAG CTGCGGGCGA TTGCCGATAC CCTGGATGAT
CTGGCCGCCG GCCGGCCGAT GGACCGCCTG ATTTGCGGCG ATGTCGGCTT TGGCAAGACC
GAGGTGGCGC TCCGCGCCGC CTTCGCCACG GCGATGAGCG GCCGGCAGGT GGCGGTGGTG
GTGCCCACCA CCTTGCTCGC CCGCCAGCAT CATCTGACCT TCAAGGAACG CTTCGCCGGC
CTGCCGGTGC GCATCGGCCA GTTGTCGCGG CTGGTCACGG CCAGGGACAC CAAGGCGGTC
AAGGAGGAGA TGGCGGCCGG CACGCTCGAT ATCGTCGTCG GCACCCATGC GCTTTTGGCC
AAGACGGTGC GCTTCCGCGA CCTGGGCCTG CTGATCGTCG ACGAGGAGCA GCATTTTGGC
GTCGCCCATA AGGAACGCCT GAAGCAGATG CGCGCCGATG TCCATGTGCT GACCCTGACG
GCGACGCCGA TCCCGCGCAC CTTGCAACTG GCCCTGACCG GCGTGCGCGA AATGAGCATC
ATCGCCACCC CGCCGGTCGA CCGGCTGGCG GTGCGGACCT TCGTGCTGCC CTTCGATCCG
GTGGTGGTCC GCGAGGCCAT CCTGCGCGAA CGCTTCCGCG GCGGTCAGTG CTTCTATGTC
TGCCCCAGGC TGACCGATAT CGACAAGGTG ATGGAACGCC TGACCACCCT GGTTCCCGAT
ATTCGGGCGG TGGTCGCCCA TGGCCAGATG GCGCCCTCGC GCTTGGAAGA GGTGATGACC
GCCTTCGCCG ATGGTCAGTA CGACGTGCTG GTCGCCACCA ATATCGTCGA AAGCGGCCTC
GACATCCCCA GGGCCAATAC CATCATCATC CACCGCGCCG ATATGTTCGG CCTTGCCCAG
CTTTATCAGC TGCGCGGCCG GGTTGGCCGG GCGCGGGCGC GTGGCTATGC CTATTTGACC
CTGCCGCCCG GCCGCACGGT CTCGAAAACC GCCGCCAAGC GGCTGGATGT AATGCAGACC
CTCGACACCC TGGGGGCCGG CTTCACCCTG GCCAGCCATG ATCTTGATAT TCGCGGCGCC
GGTAACCTGC TCGGCGATGA ACAATCGGGC CATATCAAGG AAGTCGGCAT CGAGCTTTAT
CAGCAGCTTC TGGAAGAGGC GGTGGCCGCC GCCCGCGAGG GGCCGGGGGT GGAAGAGGCC
AGCGGCGCCT GGTCGCCGCA GATCCAGCTC GGCACGCCGA TCCTCATCCC CGATTCCTAC
GTCAAGGACC TCGGGCTGCG CCTTGGCCTC TATCGCCGTA TCGCCGGAGT CACCGACGAA
GCGGAGATCG ACGAGATGGC CGCCGAGATG GTCGATCGCT TCGGCCCGCT GCCCGACGAG
GTGGAGAACC TGCTGAAGGT GGTGACCATC AAGGTTCTGT GCCGCCGCGC CAATGCGGAA
AAGGTCGATG CCGGCCCCAA GGGGGCGGTG CTGTCCTTCC GCGACAACCT GTTTCCCAAT
CCGGGCGGTC TGGTGCGCTT CATCGGTCAG AACGTCGCCA CCGTCAAGCT GCGTCCCGAT
CACAAGCTGG TCTATCGCCG TGACTGGGAG GTTGCGCGCG AGCGGATCCA GGGGCTGGGC
AAATTGATGC GCACCTTGGC CGATATCGCC GACGAGGAGC GGCCGGGCCG CTGA
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| Protein sequence | MKNLLESLAV GRRIEAAGLP EGFDALVLGE LAARPGVPAV LHVARDDVRL ARLAETIAFF
HPAVEILEFP AWDCVPYDRV SPNVEIVARR LETLSRLSEE PTRQPGGRLV LTTASAILQR
VPPRQILERG VFSARVGGRL DLGKLLDHLA RHGYGRSEQV MEPGEYAVRG GIVDIFPPGA
PEPLRLDLFG DELDSLRSFD PVSQRTTGQR DALILRPMSE VVLDKESISR FRSGYRELFG
TPSAADALYE AISAGLPFMG MEHWLPLFHE GMDTLFAYVP DGPVTLDPGL DGALRSRQDQ
IFEYFEARRL MESVGDGAKA SEKPGGGMIY HALPPPRMFL EEDEFLRHCA GRPGAAFSAY
AAPDVATEKG VVGDFLGRPG HEFADIRARA GGNVFDALRD HAQALRAAGK RVVLTAATMG
ARERMTGVLR EHGLSPIVTA ETWAEALERA KKATVVLTLI LDRGFETPDL AVISEADVLG
DRLSRPVRKK KLGDKFIPDI SALSEGDLVV HVDHGIGQYE GLETLTAGGA PHDCLRVVYA
DNNRLYVPVE NIEVLSRYGS EQAGVQLDKL GGVAWQARKA KLKQRIRDMA EQLIGVAAAR
QLKVGEVISP PEGLYDEFAA RFPYAETDDQ LRAIADTLDD LAAGRPMDRL ICGDVGFGKT
EVALRAAFAT AMSGRQVAVV VPTTLLARQH HLTFKERFAG LPVRIGQLSR LVTARDTKAV
KEEMAAGTLD IVVGTHALLA KTVRFRDLGL LIVDEEQHFG VAHKERLKQM RADVHVLTLT
ATPIPRTLQL ALTGVREMSI IATPPVDRLA VRTFVLPFDP VVVREAILRE RFRGGQCFYV
CPRLTDIDKV MERLTTLVPD IRAVVAHGQM APSRLEEVMT AFADGQYDVL VATNIVESGL
DIPRANTIII HRADMFGLAQ LYQLRGRVGR ARARGYAYLT LPPGRTVSKT AAKRLDVMQT
LDTLGAGFTL ASHDLDIRGA GNLLGDEQSG HIKEVGIELY QQLLEEAVAA AREGPGVEEA
SGAWSPQIQL GTPILIPDSY VKDLGLRLGL YRRIAGVTDE AEIDEMAAEM VDRFGPLPDE
VENLLKVVTI KVLCRRANAE KVDAGPKGAV LSFRDNLFPN PGGLVRFIGQ NVATVKLRPD
HKLVYRRDWE VARERIQGLG KLMRTLADIA DEERPGR
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