Gene Rru_A1677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1677 
Symbol 
ID3835097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1966637 
End bp1967737 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content63% 
IMG OID637825772 
ProductSignal transduction histidine kinase, nitrogen specific, NtrB 
Protein accessionYP_426764 
Protein GI83593012 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.304521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAAGA TTTCTGCCCT GACCCGGCGC GCGCCGGTTC CCTCGATCGA CCCGGCGACG 
GTGCTGAGCG CCATCGCTTC GGCGGTGATC TGTGTCGACG AGGCCGACCG GGTGCAATTC
GTCAATGCCG CCGGCGAGCA GATGTTCGAA AGCACCTGGG CGCTGTTGCG CGGCATGGCG
CTCTCGGACC TGATTCCGCC CGATTGTCCG ATCTTTGGAT TGATGGAAAA GGTTCGGCGC
AATCATTCGA CTTTTTCGGA ATACGGGGTG CAGCTTGATA CCCCGCGCAC CGGCCAGCGC
ACCATCACCG TGCGCGTGTC GCCTTTGGCC GAATACGAGA ACTGGGTGGT GATCTCGCTC
CATGAACTGT CGATGGCCTT GAAGATCGGC CAGCAGATGA GCCACCGCAA CGCCGCCCGC
TCGGTGACGG CAATGGCCGC CCTGCTTGCC CATGAGGTCA AGAACCCGCT GTCGGGGATT
CGCGGGGCGG CCCAGCTTCT GGAAGCCAAT CTGCCCGAAG AGGACCACCA GCTGGTCCGG
CTGATCATCG ACGAGACCGA CCGCATCGTT GCCCTGGTCG ACCGCATGGA GGTTTTCTCC
GACAACATGC CGCTGGCCCG CGAGGCGGTG AACATCCACC GGGTTCTCGA GCATGTGCGC
ATGGTCGCCG AAAACGGCTT CGCCCGCGGT GTCCGCTTCG TCGAGACCTA TGATCCGTCC
TTGCCCGCCG TTTTGGGCAG CCGCGACCAG TTGATCCAGG TGTTCCTCAA TCTGATCAAG
AACGCCGCCG AGGCGATCGG CCCGGGCGGC GGCGAGATCG TGCTGTCGAC CGCCTATCAG
CAGGGCCTGA GATTACGGGT GCCGGGCGGC GAGGTGACCG ATTTGCCGCT GGTCATCAGC
GTGCGCGACA ATGGTACCAC CGGTATCTCG GAAGATCTGC GCGGCAATCT GTTCGATCCC
TTCGTCACCA CCAAGCCCAA GGGCAGTGGT CTGGGGCTGC CGCTGGTGGC CAAGATCGTC
AACGATCACG GCGGCATCAT CGAATTCGAC AGCGTTCCCG GCCGCACGGT GTTCACCGTC
ATGCTGCCGA TGGTCCGCTG A
 
Protein sequence
MVKISALTRR APVPSIDPAT VLSAIASAVI CVDEADRVQF VNAAGEQMFE STWALLRGMA 
LSDLIPPDCP IFGLMEKVRR NHSTFSEYGV QLDTPRTGQR TITVRVSPLA EYENWVVISL
HELSMALKIG QQMSHRNAAR SVTAMAALLA HEVKNPLSGI RGAAQLLEAN LPEEDHQLVR
LIIDETDRIV ALVDRMEVFS DNMPLAREAV NIHRVLEHVR MVAENGFARG VRFVETYDPS
LPAVLGSRDQ LIQVFLNLIK NAAEAIGPGG GEIVLSTAYQ QGLRLRVPGG EVTDLPLVIS
VRDNGTTGIS EDLRGNLFDP FVTTKPKGSG LGLPLVAKIV NDHGGIIEFD SVPGRTVFTV
MLPMVR