Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1658 |
Symbol | |
ID | 3835077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 1948973 |
End bp | 1950601 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637825752 |
Product | acyl-CoA synthetase |
Protein accession | YP_426745 |
Protein GI | 83592993 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.125326 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGTCTC CCTACAGCAC CGGACTTGAT CGCACACCCG CCAACCATGT TCCCCTGACG CCGCTGGCCT TCCTTGACAG GGCGGCGCAG GTTTTCCCAG ACCGTCCTTC CCTTGTCCAC GGCAAACGCC GCTATACCTG GGCCGAAACG GCCCAGCGCG CCCGCCGGCT GGCTTCGGCC CTGCGGGCGC GCGGCATCGG CCCCGAGGAT ACGGTGGCGG TGATGGGCGC CAATACCCCC GAGCTTTACG AGGCCCATTT CGGCGTGCCG ATGGCCGGGG CGGTGCTCAA CGCCCTTAAC GTTCGCCTCA ACGCCGAGGA GATCGCCTTT ATCCTGGAGC ATGGCGAGGC GCGCGTTCTG CTGACCGATA CCGAGTTTTC GCCGATCATC GCCGACGCCC TCGCCCGCAT CGATCGGCCG ATCACGGTGA TCGACATCGT CGATCCCGAA TACGACGGCC CCGGCGCTTG CGTCGGCGAG ATGGAGTACG AGGCCTTTCT GGCCGAGGGC GATCCAACCG CCGATTGGCG CTGGCCGGCC GACGAATGGG AATCGATCAC GCTCAACTAT ACCTCGGGAA CCACCGGCAA TCCCAAGGGC GTGGTTTACC ACCACCGCGG CGCCTATTTG AACGCGCTTT CGAACATCAT CACCTGGGGG ATGCCCCACC ATGCCGTTTA TCTGTGGACC TTGCCGATGT TCCACTGCAA CGGTTGGTGT TTCCCCTGGA CGATGGCGGC CAATGCGGGA ACCAACGTCT GCCTGCGCCG GGTGACGGCG GCGGGCATCT TCCAGGCCAT CGCCGAGGAA AAGGTCAGCC ACTTCTGCGG CGCGCCGATC GTGCTGAGCT TTCTGATCAA CGCCCGCCCC GAAGAACGGC GGTCCTTTGA TCATCAGGTC AACGTGATGA CCGCCGCCGC CCCGCCGCCG GCCTCGGTCC TGGAAAAAAT GCAGCGCGAG GGCTTCTGCG TGACCCATGT GTACGGTCTG ACGGAAACCT ATGGCCCGGC CACCGTTTGC GCCTGGAAGG AACCGTGGAA CGACCTGCCG ATGGACGAAC AGGCGCGGCT GAAATCGCGC CAAGGAGTGC GCTATCTGGT TCAGGAAGGC TTGATGGTCG GCGATCCGGA AACCATGGAG GCGGTTCCCG CCGACGGCGA AAGCATGGGC GAGGTGTTTT TCCGCGGCAA TATCACCATG AAAGGCTATC TGAAGAATCC CGAGGCCACC GCCGAGGCCT TTCGCGGCGG CTGGTTCCAC ACCGGGGATC TTGGGGTTCT TCATCCCGAT GGCTATCTTC AGCTCAAGGA TCGCTCCAAG GACATCATCA TCTCGGGGGG CGAGAATATC TCGTCGATCG AGGTCGAGGG CGTGCTCCAT CGTCACCCTG ACGTTGTCGC CGCCGCCGTT GTCGCCAAAC CCGATGAGAA ATGGGGAGAA ACCCCTAAAG CTTATGTGGA GTTACGCGAC GGCGCTACGG TAACAGAGGA TGAACTTGTG GCCTTTTGTC GGCTCCATCT GGCACATTAT AAATGCCCTC GGGATGTTGA GGTGGGGCCG CTGCCAAAAA CATCGACGGG TAAGATCCAG AAGTTCGTTC TGCGCCGGCA GGTGCGAGCG GAAGGATAA
|
Protein sequence | MPSPYSTGLD RTPANHVPLT PLAFLDRAAQ VFPDRPSLVH GKRRYTWAET AQRARRLASA LRARGIGPED TVAVMGANTP ELYEAHFGVP MAGAVLNALN VRLNAEEIAF ILEHGEARVL LTDTEFSPII ADALARIDRP ITVIDIVDPE YDGPGACVGE MEYEAFLAEG DPTADWRWPA DEWESITLNY TSGTTGNPKG VVYHHRGAYL NALSNIITWG MPHHAVYLWT LPMFHCNGWC FPWTMAANAG TNVCLRRVTA AGIFQAIAEE KVSHFCGAPI VLSFLINARP EERRSFDHQV NVMTAAAPPP ASVLEKMQRE GFCVTHVYGL TETYGPATVC AWKEPWNDLP MDEQARLKSR QGVRYLVQEG LMVGDPETME AVPADGESMG EVFFRGNITM KGYLKNPEAT AEAFRGGWFH TGDLGVLHPD GYLQLKDRSK DIIISGGENI SSIEVEGVLH RHPDVVAAAV VAKPDEKWGE TPKAYVELRD GATVTEDELV AFCRLHLAHY KCPRDVEVGP LPKTSTGKIQ KFVLRRQVRA EG
|
| |