Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1652 |
Symbol | |
ID | 3835071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 1942998 |
End bp | 1943897 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637825746 |
Product | LysR family transcriptional regulator |
Protein accession | YP_426739 |
Protein GI | 83592987 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0547251 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACCTCG CCGCGCTAGC GGTCTTTCGC ACGGTGGCCC GCGAACAGAG CGTCACCCGC GCCGCCGAAC TGCTTGGCCG GGTTCCCTCG AATGTCACGA CCCGCGTTCA GCAGCTCGAG GCGGAAATCG GCGTGGCGCT GTTTCAACGC GACAAGAAGC GCATGGTGTT GACGGCGGCA GGCGAGACCT ATCTCGACTA TGCCGAGCGC ATTCTGAATT TGGCCGAGGA GGCGCAACAG CGTGTCAAGC CGCTCGCTCC GTTTGGAACC TTGCGCGTCG GCTCAATGGA ATGCGCGGTC GCCAGCCGGC TCCCCGCCCC GCTCGCCCGC TACAGCGCCG CTTGGCCGCA GGTGAGGATC GAGCTGACGA CCGCGCCGAC CCGTCCCCTG ATCGAGGCGG TTCTGGCGCG GCGGATCGAT TGCGCGCTGA TCGCCCTGCC CTCGGGCGAG GGGTGGCTCG GGCCTACCCC CCTCGACACG GTGCCGGTAT TCCGCGAGGA CTTGGTTTTG CTGCTGCCGC ACGGCCATCC CGAAGTCCAC ACAGCCGAAG ATATCAAGCC CCGAACCCTG GCGACCTTCG CGCCGGGGTG CACCTACCGC GGGCTCGCCG AAGACTGGCT GACCGACCAG GGCCGGCGGC AGATGGCGTT CGCCATCCAG GAGGTTCGGT CCTACCACGC GATGTTCGCC TGCACGGCGG CGGGATCTTG CGTCAGCGTC ATGCCGCGCG GCTTGGTCGA GCTCATGGAT CATCGGGAAG CGGTCGAGGA AAAGCCGCTG AGGACGGTCG ACACGTACCT CGCCTCCCGC CCCGGCTTCG CGACGTCCGC TTTCGCCGCC TTCCGCGAGA CGCTGGGCGA ATTCTCGGAC TTCAAGGAGG AAGGCGATGG AGCGGGCTGA
|
Protein sequence | MDLAALAVFR TVAREQSVTR AAELLGRVPS NVTTRVQQLE AEIGVALFQR DKKRMVLTAA GETYLDYAER ILNLAEEAQQ RVKPLAPFGT LRVGSMECAV ASRLPAPLAR YSAAWPQVRI ELTTAPTRPL IEAVLARRID CALIALPSGE GWLGPTPLDT VPVFREDLVL LLPHGHPEVH TAEDIKPRTL ATFAPGCTYR GLAEDWLTDQ GRRQMAFAIQ EVRSYHAMFA CTAAGSCVSV MPRGLVELMD HREAVEEKPL RTVDTYLASR PGFATSAFAA FRETLGEFSD FKEEGDGAG
|
| |