Gene Rru_A1652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1652 
Symbol 
ID3835071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1942998 
End bp1943897 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content68% 
IMG OID637825746 
ProductLysR family transcriptional regulator 
Protein accessionYP_426739 
Protein GI83592987 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0547251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCTCG CCGCGCTAGC GGTCTTTCGC ACGGTGGCCC GCGAACAGAG CGTCACCCGC 
GCCGCCGAAC TGCTTGGCCG GGTTCCCTCG AATGTCACGA CCCGCGTTCA GCAGCTCGAG
GCGGAAATCG GCGTGGCGCT GTTTCAACGC GACAAGAAGC GCATGGTGTT GACGGCGGCA
GGCGAGACCT ATCTCGACTA TGCCGAGCGC ATTCTGAATT TGGCCGAGGA GGCGCAACAG
CGTGTCAAGC CGCTCGCTCC GTTTGGAACC TTGCGCGTCG GCTCAATGGA ATGCGCGGTC
GCCAGCCGGC TCCCCGCCCC GCTCGCCCGC TACAGCGCCG CTTGGCCGCA GGTGAGGATC
GAGCTGACGA CCGCGCCGAC CCGTCCCCTG ATCGAGGCGG TTCTGGCGCG GCGGATCGAT
TGCGCGCTGA TCGCCCTGCC CTCGGGCGAG GGGTGGCTCG GGCCTACCCC CCTCGACACG
GTGCCGGTAT TCCGCGAGGA CTTGGTTTTG CTGCTGCCGC ACGGCCATCC CGAAGTCCAC
ACAGCCGAAG ATATCAAGCC CCGAACCCTG GCGACCTTCG CGCCGGGGTG CACCTACCGC
GGGCTCGCCG AAGACTGGCT GACCGACCAG GGCCGGCGGC AGATGGCGTT CGCCATCCAG
GAGGTTCGGT CCTACCACGC GATGTTCGCC TGCACGGCGG CGGGATCTTG CGTCAGCGTC
ATGCCGCGCG GCTTGGTCGA GCTCATGGAT CATCGGGAAG CGGTCGAGGA AAAGCCGCTG
AGGACGGTCG ACACGTACCT CGCCTCCCGC CCCGGCTTCG CGACGTCCGC TTTCGCCGCC
TTCCGCGAGA CGCTGGGCGA ATTCTCGGAC TTCAAGGAGG AAGGCGATGG AGCGGGCTGA
 
Protein sequence
MDLAALAVFR TVAREQSVTR AAELLGRVPS NVTTRVQQLE AEIGVALFQR DKKRMVLTAA 
GETYLDYAER ILNLAEEAQQ RVKPLAPFGT LRVGSMECAV ASRLPAPLAR YSAAWPQVRI
ELTTAPTRPL IEAVLARRID CALIALPSGE GWLGPTPLDT VPVFREDLVL LLPHGHPEVH
TAEDIKPRTL ATFAPGCTYR GLAEDWLTDQ GRRQMAFAIQ EVRSYHAMFA CTAAGSCVSV
MPRGLVELMD HREAVEEKPL RTVDTYLASR PGFATSAFAA FRETLGEFSD FKEEGDGAG