Gene Rru_A1645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1645 
Symbol 
ID3835062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp1933506 
End bp1934138 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content69% 
IMG OID637825737 
Producthypothetical protein 
Protein accessionYP_426732 
Protein GI83592980 
COG category[S] Function unknown 
COG ID[COG1430] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0289235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGGTAG GCCCCCTGCC GGGACGGAAA GGAAGCAAGA TGATGCGACG GTGGCCAAAA 
CTGGGGCGAC GCGATCTGGC CCTGTGGCTG GGCGGCGCGG TCTGTCTGGC GCTGACCGTG 
CCAGCGCCCT CGGCCGCCTG GGCGCAACCC CAGCCGTCGG TGGTCCGGCC GAACCTTGGT 
CTGGACGCCC CCCCCGACAC CCGGGGGCGG TTCGCTAAAT CGAAGCTGAC CATCGTGACC 
GACGACGGCC GCAGCCTGCC CTTTTTCGTG GAACTGGCGA CCACGGCCAA TCAACGGGCC 
CTGGGCCTGA TGTTCCGCAA GGATCTGGCT GCCGATGCCG GCATGCTGTT CGTCTGGGAC 
GAGCCGGGGC AGCGGGCGAT GTGGATGAAG AACACGCTGA TCGGCCTTGA TATGCTGTTT 
CTTGACGCCG AGGGGCTGGT GGTCGGCATC GCCGAGAACG CCGAGCCGGG CAGCCTGCGC 
CATATCGAAG CCCCCGAACC CTGCGTCGGC GTGCTGGAAC TCAACGCCGG AACCACCCGG 
CTGCTGTCGA TCGACCCCGG GGATCGGGTG GTTCATCCGC TGTTGGGCGG CCCGGCCGAG 
GGGGCGATGG GCGCCGCCCG CCCCAGCCGC TGA
 
Protein sequence
MGVGPLPGRK GSKMMRRWPK LGRRDLALWL GGAVCLALTV PAPSAAWAQP QPSVVRPNLG 
LDAPPDTRGR FAKSKLTIVT DDGRSLPFFV ELATTANQRA LGLMFRKDLA ADAGMLFVWD 
EPGQRAMWMK NTLIGLDMLF LDAEGLVVGI AENAEPGSLR HIEAPEPCVG VLELNAGTTR 
LLSIDPGDRV VHPLLGGPAE GAMGAARPSR