| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1606 |
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| Symbol | |
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| ID | 3835023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 1896674 |
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| End bp | 1898863 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637825698 |
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| Product | glycogen debranching protein GlgX |
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| Protein accession | YP_426693 |
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| Protein GI | 83592941 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.333423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCTTA CGCGACCGCG AGTCTGGCCC GGCCGCCCCT ATCCCCTTGG CGGGACCTGG
GATGGCCGGG GGGTCAATTT TGCGTTGTTT TCCGAGCATG CGGAAAAGGT GGAACTTTGC
CTTTTCGACG GGGATGACGG CCGGGAACTC TCGCGCGTTC CTCTTCCCGA ATACACCGAT
GAGATTTGGC ATGGCTATCT GCCCGACGTT CGCCCGGGCC AGCGCTACGG CTATCGGGTT
TACGGCCCCT ATGCCCCCCA TGCCGGCCAT CGTTTCAATC CCAACAAGCT GGTGCTCGAC
CCTTACGCCC GTTCGTGGGG CGGGCGCCTG CAGTGGACCG ATGCCCATTT CGGCTATCGC
TTCGGCGCGG CGTCGGAAGA TCTGACCTTC GACACCCGCG ACAATTCCGC CTTCATGCCC
AAATGCGTCA TCGTCGAAAC CGCCTTCACC TGGGATGACG ACCGCGCCCC GCGCCGGCCC
TGGCACGACA GCGTGTTGTA CGAGCTTCAC GTCAAGGGCT TCACCATCCG CCATCCCGAG
GTGCCGCGCG CCATTCGCGG CACCTTCGCC GGCATGTCGA CCCAGGCGGT GGTGTCCTAT
CTGAAATCCC TGGGCATCAC GGCGATCGAG CTTTTGCCGG TTCAGGCCTT TGTCGATGAG
CGCCATCTGG TCAAGAACAA CTTGACCAAT TATTGGGGTT ACGCCTCGCT GGGTTATTTC
GCCCCCCAGC CGTCCTATCT GGCCAGCGGC AAGCTGGGCG AGTTCAAGAC CTTCGTGCAG
GTCATGCATG ACGCCGGCAT CGAGGTTATC CTTGATGTCG TTTACAACCA TACGGCCGAG
GGCAATCACC TTGGCCCGAC CTTCAGTTTC AAAGGCATCG ACAACGCCAG CTATTACCGG
CTGGTGCCGG GCAACGAGCG TTTCTACGCC GACAGCACGG GCTGCGGCAA CGCGCTCAAC
CTGCGCCACC CCCGGGTTTT GCAGATGGTC ATGGACTCGC TGCGCTATTG GGTGCGCGAG
ATGCATGTCG ATGGTTTCCG CTTCGATCTG GCGACGACCC TGGCCCGCGA CCACGGCCGC
TTCGATCCCC ATTCCGCCTT TATCGAGGCC CTGCGCCAGG ATCCGGTGCT CTCCACCGTC
AAGCTGATCG CCGAGCCCTG GGACGTCGGC GATGGCGGCT ACCGGCTGGG CGGCTTCCCC
CCGGGCTTCG CCGAATGGAA TGACCGTTAC CGCGATACCG TGCGGCGCTT TTGGAAGGGC
GATCGCGGGC AGGTGGCCGA TCTGGCGACC CGGCTGACCG GGTCTTCGGA CCTGTTCGCC
AATCGCGGCC GCTGCCCCTG GGCCAGCATC AATTTCGTCA CCGCCCATGA CGGGTTCACC
CTGGCCGATC TTGTCTCCTA CAACGGCAAG CACAACGAGG CCAATGGCGA GAACAACCGG
GACGGCACGG ATAACAACAA TTCGTGGAAC CACGGGATTG AAGGGCCGAC CTCGGATCCG
TCGATCCAGG CCTTGCGCCG TCGGCAGGTG CGGAACTTCC TTGCCACCTT GCTGTTGTCG
CAAGGGGTGC CGATGCTGGT GGCCGGCGAT GAATTCGGGC GCAGCCAGCG CGGCAACAAC
AATCCCTACT GCCAGGACAA CGAGATTTCC TGGATCAATT GGGCGGCGAT CGATGCCGAG
GGCCAGTCCC TCGCCCGCAT GGTGCGCTGG CTGATACGCT TGCGCCGGCG CCATATCGTC
TTTCATCGCA ACCGCTTCTT TCACGGAACG ACCCTGCGCG GCACCGATGT CAAGGACATC
ACCTGGCTTG AGCCCGACGG CCGCGAGCGC TCCGATGCCC GCGATTGGAC CGACCCGGAA
GAGCGTTTCC TGGCCTTTCT CATCCGCGGC GAGGCCGGCG AGTACTTTGT GACCGAAATG
GGCGATCCCG AGCCCGATCA TAGCTTTTTG GTAGCCCTGA ACGCCGATTC CCGCCCGGTG
CCGATGCTTC TGCCCGTGCT GACGGCGGGC ACGCGCTGGG TCTTGCTGTT CGACACGGCG
CGGCCGGGGG CGGAACGGCG CCCGGCCCCG GCCGACGGCA AGATGTATTC GGTGGAGGGG
CGATCGCTGA CGGTGTTCCG GCGCGAGCCG GGACTGCGGG ATGGGGATGG GGATGGTCCC
TGGGAATTGG ATGGCTTCCC CGAGGTATGA
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| Protein sequence | MPLTRPRVWP GRPYPLGGTW DGRGVNFALF SEHAEKVELC LFDGDDGREL SRVPLPEYTD
EIWHGYLPDV RPGQRYGYRV YGPYAPHAGH RFNPNKLVLD PYARSWGGRL QWTDAHFGYR
FGAASEDLTF DTRDNSAFMP KCVIVETAFT WDDDRAPRRP WHDSVLYELH VKGFTIRHPE
VPRAIRGTFA GMSTQAVVSY LKSLGITAIE LLPVQAFVDE RHLVKNNLTN YWGYASLGYF
APQPSYLASG KLGEFKTFVQ VMHDAGIEVI LDVVYNHTAE GNHLGPTFSF KGIDNASYYR
LVPGNERFYA DSTGCGNALN LRHPRVLQMV MDSLRYWVRE MHVDGFRFDL ATTLARDHGR
FDPHSAFIEA LRQDPVLSTV KLIAEPWDVG DGGYRLGGFP PGFAEWNDRY RDTVRRFWKG
DRGQVADLAT RLTGSSDLFA NRGRCPWASI NFVTAHDGFT LADLVSYNGK HNEANGENNR
DGTDNNNSWN HGIEGPTSDP SIQALRRRQV RNFLATLLLS QGVPMLVAGD EFGRSQRGNN
NPYCQDNEIS WINWAAIDAE GQSLARMVRW LIRLRRRHIV FHRNRFFHGT TLRGTDVKDI
TWLEPDGRER SDARDWTDPE ERFLAFLIRG EAGEYFVTEM GDPEPDHSFL VALNADSRPV
PMLLPVLTAG TRWVLLFDTA RPGAERRPAP ADGKMYSVEG RSLTVFRREP GLRDGDGDGP
WELDGFPEV
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