| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1552 |
|---|
| Symbol | |
|---|
| ID | 3834968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 1830342 |
|---|
| End bp | 1832762 |
|---|
| Gene Length | 2421 bp |
|---|
| Protein Length | 806 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637825643 |
|---|
| Product | Lon-A peptidase |
|---|
| Protein accession | YP_426639 |
|---|
| Protein GI | 83592887 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
|---|
| TIGRFAM ID | [TIGR00763] ATP-dependent protease La
[TIGR00764] lon-related putative ATP-dependent protease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACGCTA TTCCCACACA AGTCTTTCCC GTCCTGCCGC TGCGGGATAT CGTCGTCTTC
CCGCATATGA TCGTGCCGCT GTTCGTAGGG CGCGAGAAAT CCGTGCGCGC CCTTGAAGAC
GTGATGCGCG AGGACAAGCA GATCCTGCTT GTCGCGCAGA AGAACGCCAC GCAAGACGAC
CCCGGTCCCG ACGATATCTA TACGGTCGGC ACCGTCAGCA CCGTGCTTCA GTTGCTGCGC
CTGCCCGACG GCACGGTGAA GGTCCTGGTC GAGGGCAGCC ATCGCGCCCG CATCGGCGCC
TATACCGCGC GCGAGGACTT CTTCGAGGCC GAGGCGACGA TCCTGGCCGA CGACGAGGGC
GATCACCAGG AGATCGAGGC GCTGGGCCGC TCGGTGATCA ACCAGTTCGA ACAGTACATC
AAGCTCAACA AGAAGATTCC GCCCGAGGTT CTGGTCTCGA TCAACCAGAT CGAGGACGCG
GCCAAACTGG CCGATACGGT GGCGTCGCAT CTGGTGCTCA AGATCGCCGA CAAGCAGGAA
CTGCTTGAGA TCGAGACGAT CGCCGAGCGG CTGGAGCGGG TCTATTCCTT CATGGAGTCC
GAAATCGGCG TGCTCCAGGT GGAAAAGAAG ATCCGCAACC GCGTGAAGCG CCAGATGGAG
AAGACCCAGC GCGAGTACTA TCTGAACGAG CAGCTCAAGG CCATTCAGAA GGAGCTGGGC
GAGGGCGAGG ACGGCCGCGA CGAGCTTCAA GAGCTGGAAG ACCGCATCGC CGAGACCAAG
CTGACCAAGG AGGCCAAGGA AAAGGCCCTG GGCGAGCTGA AGAAGCTGCG CAACATGAGC
CCGATGTCGG CCGAGGCCAC GGTGGTGCGC AACTACCTTG ACTGGATGCT GGCCATTCCC
TGGCAGAAGC GCACCCGGGT CAAGAAGGAC CTGAAGATCG CCCATAACGT TCTCAACACC
GATCACTACG GCCTTGATAA GGTCAAGGAC CGCATCCTTG AATATCTGGC CGTTCAGCTG
CGCACCCAGA AGATCAAGGG GCCGATCCTC TGCCTCGTCG GTCCGCCGGG CGTCGGCAAG
ACCTCGCTTG GCAAGTCGAT CGCCCGGGCG ACGGGGCGGA ATTTCGTGCG GGTGTCGCTG
GGCGGCGTGC GCGACGAGTC CGAGATCCGT GGCCACCGGC GCACCTATAT CGGCTCGATG
CCCGGCAAGA TCATTCAGGG GATGCGCAAG GCCAAGTCGT CCAACCCGTT CTTCCTGCTC
GACGAGATCG ACAAGCTGGG CAACGACTGG CGCGGCGATC CGTCCTCGGC CCTGCTCGAG
GTGCTCGACC CCGAACAGAA CAACACCTTC AATGATCACT ACCTCGAGGT TGATTATGAC
CTCTCGGACG TGATGTTCAT GACCACGGCC AATTCGCTGC GCATGCCCCA GCCGCTGCTT
GACCGCATGG AGATCATTCG CCTCTCGGGC TATACCGAGG ACGAGAAGAT CGAAATCGCC
AAGCGCCACC TGATCGACAA GCAGGTGAAG GCCAATGGCT TGCGTCGCGG CGAATGGTCG
ATTTCCGACG ACGCCCTGCG CGACCTGATC CGCTATTACA CCCGGGAAGC CGGCGTGCGC
AGCTTGGAAC GCGAACTGGC CAATCTGACC CGTAAGGCGA CCAAGGAAAT CCTGCTGCGC
AAGGGCGCCA AGGTCGGGGT CAAGGTGACC CGCGCCAATC TCGAAAAATA CTCGGGCGTT
CGCAAATACC GTTATGGCGA GGCCGAGCGC GAGGATCTGG TGGGGGTGAC CACCGGTCTA
GCCTGGACCG AGGTCGGCGG CGAATTGCTG TCGATCGAGG CGGTGATGAT GCCGGGTAAG
GGTCAGGTCA CCCTGACCGG CCAGCTTGGC GACGTGATGA AGGAATCCGT TCAGGCGGCC
CGCTCGTTCG TCCGCTCGCG CGCCGTGACC TATGGCATCA AGCCGACCCA ATTCGAGAAG
GGCGACATCC ACGTTCACGT TCCCGAAGGG GCCACCCCGA AGGACGGCCC CTCGGCCGGT
GTCGCCATGT GCACCTCGAT CGTTTCGGCG ATGACCGGCA TCGCCGTGCG CAAGGACATC
GCCATGACCG GCGAGATCAC CCTGCGCGGG CGGGTTCTGC CGATCGGCGG CTTGAAGGAA
AAGCTGCTGG CGGCCTTGCG CGGCGGCATC AAGACGGTTC TGATCCCCAA GGATAACGAA
AAGGATCTGG CCGAGATTCC CGATAACGTC AAACGCGGCC TGACCATCAT TCCGGTCGGG
CATGCCGATG AGGTTCTGGA ATTGGCCCTG GTGCGTAAGC TGACGCCGAT CGAATGGATC
TCGCCCGATG AGGCTGAGGA AGCCCGGCTG AAGTCGAAGG CGGCCGAGGC TCCGGCGGAG
GGCGACGTCG TTACCCATTA A
|
|---|
| Protein sequence | MNAIPTQVFP VLPLRDIVVF PHMIVPLFVG REKSVRALED VMREDKQILL VAQKNATQDD
PGPDDIYTVG TVSTVLQLLR LPDGTVKVLV EGSHRARIGA YTAREDFFEA EATILADDEG
DHQEIEALGR SVINQFEQYI KLNKKIPPEV LVSINQIEDA AKLADTVASH LVLKIADKQE
LLEIETIAER LERVYSFMES EIGVLQVEKK IRNRVKRQME KTQREYYLNE QLKAIQKELG
EGEDGRDELQ ELEDRIAETK LTKEAKEKAL GELKKLRNMS PMSAEATVVR NYLDWMLAIP
WQKRTRVKKD LKIAHNVLNT DHYGLDKVKD RILEYLAVQL RTQKIKGPIL CLVGPPGVGK
TSLGKSIARA TGRNFVRVSL GGVRDESEIR GHRRTYIGSM PGKIIQGMRK AKSSNPFFLL
DEIDKLGNDW RGDPSSALLE VLDPEQNNTF NDHYLEVDYD LSDVMFMTTA NSLRMPQPLL
DRMEIIRLSG YTEDEKIEIA KRHLIDKQVK ANGLRRGEWS ISDDALRDLI RYYTREAGVR
SLERELANLT RKATKEILLR KGAKVGVKVT RANLEKYSGV RKYRYGEAER EDLVGVTTGL
AWTEVGGELL SIEAVMMPGK GQVTLTGQLG DVMKESVQAA RSFVRSRAVT YGIKPTQFEK
GDIHVHVPEG ATPKDGPSAG VAMCTSIVSA MTGIAVRKDI AMTGEITLRG RVLPIGGLKE
KLLAALRGGI KTVLIPKDNE KDLAEIPDNV KRGLTIIPVG HADEVLELAL VRKLTPIEWI
SPDEAEEARL KSKAAEAPAE GDVVTH
|
|---|
| |