Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1542 |
Symbol | |
ID | 3834957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 1815634 |
End bp | 1817133 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637825632 |
Product | methylmalonate-semialdehyde dehydrogenase [acylating] |
Protein accession | YP_426629 |
Protein GI | 83592877 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0780531 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCTTG TGACTCATTT CATCAACGGC GCCGCCACCG CGCCGGCCGC CGGCCGTTGC CAGGATATCG TCAACCCGGC GAGCGGCGCG GTGATCGGCC GCGTCGAACT TGCCGCCAAG GCGACCGTTG AAGCCGCCAT CGCCGCCGCC GAAGCCGCCT TTCCGGCTTG GCGGGCGACG CCGCCGGCCA AACGCGCCCG GGTGATGGTG CGCTTCCGCC AGCTTCTCGA AGACAACGCC GATGCGCTGT GCGCCCTGAT CACCGCCGAG CATGGCAAGG CCCTGGACGA TGCCCGGGGC GAGCTTGGCC GGGGGATGGA GAACGTCGAT TACGCCTGCG GCATCGCCGA TCTGCTCAAG GGCGAGCGCT CGGCCAATGC CGGTCCGGGC ATCGATTGCT GGTCGGAGTT CCAGCCCTTG GGGGTGGTCG CCGGCATCAC GCCGTTTAAC TTCCCGGCCA TGGTGCCCCT GTGGATGATC CCGCTGGCCA TCGCCTGCGG CAACACCTTT GTCCTTAAGC CTTCCGAGCG CGATCCCAGC GCGGCGTTTC TGTTGGCCGA AATCGCCCTG CGGGCCGGGG TGCCGCCGGG GGTGTTCAAT GTGGTCAATG GCGATAAGGA GGCGGTTGAC ACCTTGCTGA CCGATCCCCG GGTTCAAGCC GTGGGCTTCG TCGGCTCGAC GCCGATCGCC GAATACGTCT ATGCCACCGG CACGGCGCAT GGCAAACGCG TGCAGGCCCT GGGCGGGGCC AAGAACCACG CCCTGGTGCT GGCCGATGCC GATCTCGATT TCACGGTGAA CGCCCTGATG GGGGCGGCCT TCGGCTCGGC CGGCGAGCGC TGCATGGCGA TCTCGGTGGT GCTGGCCGTC GGCGATCAAT TGGCCGACGC CCTGGTCGCC AAGCTTGCGG CCCAGCTTGC CGGGCTGAAA GTGGCGCCGG GCACCGAGGC CGGATGCGAA ATGGGGCCGC TGGTCAGCCG CGCCCATGCC GATAAGGTCG CGGGCTATGT GGCAAAGGGC GTGGCCGAGG GGGCGGAGCT GGTGGTCGAT GGCCGGGGGC TGTCGATCCC CGGCCATGAA CAGGGCTTCT TCCTGGGCGG CTGCCTGTTC GACCGCGTCA CCCCGGCGAT GACCATCTAC CGCGAGGAGA TCTTCGGGCC GGTGCTCTGC GTCGTGCGGG TCGCCAGCAT GGAAGACGGC ATGGCGCTGA TCGACGCCCA TGAATTCGGC AATGGTACCT GCCTGTTCAC CCGCGACGGC GAGGCGGCCC GCTATTTCGC CGATCACGTC AAGGTCGGCA TGGTCGGCAT CAACGTGCCG CTGCCCGTGC CGGTGGCGAC CCACAGCTTC GGCGGCTGGA AGCGCTCGCT GTTTGGCGAT CTCGCCGCTT ACGGCCCCGA TGGGGTGCGC TTTTATACCC GGCGCAAGAC CGTCAGCCAG CGCTGGCCCT CGAGCACGGT GCGCGAGGGC GCGCAGTTCG CCTTTCCGTC GATGAAGTAA
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Protein sequence | MTLVTHFING AATAPAAGRC QDIVNPASGA VIGRVELAAK ATVEAAIAAA EAAFPAWRAT PPAKRARVMV RFRQLLEDNA DALCALITAE HGKALDDARG ELGRGMENVD YACGIADLLK GERSANAGPG IDCWSEFQPL GVVAGITPFN FPAMVPLWMI PLAIACGNTF VLKPSERDPS AAFLLAEIAL RAGVPPGVFN VVNGDKEAVD TLLTDPRVQA VGFVGSTPIA EYVYATGTAH GKRVQALGGA KNHALVLADA DLDFTVNALM GAAFGSAGER CMAISVVLAV GDQLADALVA KLAAQLAGLK VAPGTEAGCE MGPLVSRAHA DKVAGYVAKG VAEGAELVVD GRGLSIPGHE QGFFLGGCLF DRVTPAMTIY REEIFGPVLC VVRVASMEDG MALIDAHEFG NGTCLFTRDG EAARYFADHV KVGMVGINVP LPVPVATHSF GGWKRSLFGD LAAYGPDGVR FYTRRKTVSQ RWPSSTVREG AQFAFPSMK
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