Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1438 |
Symbol | |
ID | 3834853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 1701111 |
End bp | 1701632 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637825528 |
Product | sigma-24 (FecI) |
Protein accession | YP_426526 |
Protein GI | 83592774 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGGTGCGG AGCGGCCTTT CGGGTCTTTG GCGCAAGCCG TCGAGACCTA TTACGATGAT CTCAAGGCCT TTATTGTGCG GCGGACCGGA TCGCCCAGCC TTGCCGCCGA TGTCGTGCAA GACACCTGGG TCAGGGCGGC TTCGGCCGAG ATCGCGATGC CCGACAACGT GCGCGCCTAT CTCTACCGGA TGGCGGCCAA TCTGGCGATC GATCACCTGC GCCGCGATGG CGCCCGGGCC CGCGGGCTTT GCGAAGAGAC CCTTCTCGAG GATATTCCCA GCGCCGAGCC GGCGGTCGAC CGCGTTGTCG CCGCCCGCCA GGAACTGGCG ATCCTGTCGC GCGCCGTCGC CGAACTTCCC GAGAAATGCC GTATCGTGTT TTTGCTCTAT CGCGGCCGCG GCCTGACGAT GAAGCAGGTC GCCGCCCGCC TGGGGATCTC GGAAAAGGCG GTGGAAAAGC ACATCGCCCG CGCCATGGTC CATTGCCGCA AGCGCATGAT CGACGCCGGA CGAAGCCCCT GA
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Protein sequence | MGAERPFGSL AQAVETYYDD LKAFIVRRTG SPSLAADVVQ DTWVRAASAE IAMPDNVRAY LYRMAANLAI DHLRRDGARA RGLCEETLLE DIPSAEPAVD RVVAARQELA ILSRAVAELP EKCRIVFLLY RGRGLTMKQV AARLGISEKA VEKHIARAMV HCRKRMIDAG RSP
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