Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1350 |
Symbol | |
ID | 3834765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 1590893 |
End bp | 1592158 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637825440 |
Product | Sodium/hydrogen exchanger |
Protein accession | YP_426438 |
Protein GI | 83592686 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.786276 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGATGGG TTGTGGACTC CTATATCATC GTCCTGGTCG GCTTCGGCGC GTTGGTTCTG CTGACTGCGT GGTTGCCGAT GGTTCTCAGG GAAGCGCCCT TGTCGCTTCC CATCCTGTGC GTGGCCATCG GCGCGGCGGT TTTCGCCCTG CCGCCGCTGG CGGGCGTGGT GCCCCGGCCC CAGGATCATC TGCCGGTGAT CGAGCGGGTC AGCGAAATGC TCGTCATCCT GTCGCTGATG GGCGCCGGAC TGAAGATCGA CCGTCCTTTT GGCTGGAAAA GCTGGGCCGT GACCGGGCGG CTGTTGGCGG CGGCGATGCC GCTGACCATC CTCGGGCTGG CCTTGGTTGG CTGGCTTGTG CTGGGGCTGG GGGCGGCCGC GGCCCTATTG CTGGCGGCGG CGCTGGCGCC CACCGATCCG GTGCTGGCCA GCGATATCCA GGTCGGCCCG CCCAATTCCG GCGAGGAAAA CCAGACCCGC TTCGCCCTGA CCTCGGAGGC CGGGCTGAAC GACGCCTTGG CCTTTCCCTT CGTTCACGCC GCCCTGGCCC TGGCCGTCGC CGGCAAGACC GGCGAGCCGT GGCTTGGCCA CTGGCTAAGC GTTGATATCG TCTGGAAACT GGGCGCCGGT TTGGCGATGG GCGTTCTGGT CGGTCACGGC TTGGCGTGGC TGCTGTTTCG TGTTCCCCAT CGGGCGAGGC TGTCGCGCTC GGGGGATGGC TTCGTCGCCC TGGGGATCAC CTGCGTCGTT TATGGCCTGA CGGAAATGGT CCAGGGCTAT GGTTTTCTCG CCGTCTTCGT CGCCGCCCTG ACCCTGCGCG CGGGTGAGCG CCGTCACGCC TATCAGGGGA CCTTGCATGA TTTCGCCGAG GCCCTTGAGC GGCTGCTGAT GATGGCCCTG CTGGTCGGGT TCGGCGCGGC GCTCAGCGGA GCGGGCCTCT TGGCGGGGCT TACCTGGGAA GGGGTGGCTT TCGGCCTGAT CGCGCTGGTC GTGGTCCGCC CACTGACCGC CTGGATCGGT CTGGCGGGCA TGGGCGGCCC TTTGGCCGAA AGGGCCATCA TCAGCCTTTA TGGCATTCGC GGCATCGGCT CGATCTACTA TCTGTCCTAT GCCCTGGGAC GGGGGAGCTT TGACGGGGAA GACCTGCTGT GGAGCACCCT GGCCTTCACC ATCCTGGTCT CGATTTTCCT GCACGGCGCG ACGGTGACGC CGGTGATGCG CGCCTTTGAG CGCCGGCAGG GGCGCGACAC CACGCCCGGC CGCTGA
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Protein sequence | MGWVVDSYII VLVGFGALVL LTAWLPMVLR EAPLSLPILC VAIGAAVFAL PPLAGVVPRP QDHLPVIERV SEMLVILSLM GAGLKIDRPF GWKSWAVTGR LLAAAMPLTI LGLALVGWLV LGLGAAAALL LAAALAPTDP VLASDIQVGP PNSGEENQTR FALTSEAGLN DALAFPFVHA ALALAVAGKT GEPWLGHWLS VDIVWKLGAG LAMGVLVGHG LAWLLFRVPH RARLSRSGDG FVALGITCVV YGLTEMVQGY GFLAVFVAAL TLRAGERRHA YQGTLHDFAE ALERLLMMAL LVGFGAALSG AGLLAGLTWE GVAFGLIALV VVRPLTAWIG LAGMGGPLAE RAIISLYGIR GIGSIYYLSY ALGRGSFDGE DLLWSTLAFT ILVSIFLHGA TVTPVMRAFE RRQGRDTTPG R
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