Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1334 |
Symbol | |
ID | 3834749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 1570355 |
End bp | 1570801 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637825424 |
Product | ribose-5-phosphate isomerase |
Protein accession | YP_426422 |
Protein GI | 83592670 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family [TIGR01120] ribose 5-phosphate isomerase B |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.126498 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATCG CGATTGGCTG TGATGAGGCG GCCTATGACC TCAAGGAAAC CTTGACGTCC TTCATCACGG CGCAGGGTCA CGAGGTGACC GATTTCGGCA CCTTCGACCG CAAGCCCGTG CTTTACCCCG ATATCGCCCA CGCCCTGGCC ACCGAGGTCG CCGCCGGCAC CCAGGACCGG GGCGTTCTGT TGTGCGGAAC CGGCATTGGC ATGGCCATCA CCGCCAATAA GGTGAAGGGA ATCCGCGCCG CCCAATGCCA TGACACCTAT TCCGCCGAAC GCGCCCGCCT GAGCAACGAT GCCCAGATCA TCACCATGGG CGCCCGCGTC ATCGGCCCCG AACTGGCCAA GGCGATCGTC CGCACCTTTT TGTCGAACGA ATTCGTCAAC GGCAGTTCGA CCCCGAAGAT CGAGCGGATC ACCGCCTATG AGAACAGCCC CGGTTAG
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Protein sequence | MKIAIGCDEA AYDLKETLTS FITAQGHEVT DFGTFDRKPV LYPDIAHALA TEVAAGTQDR GVLLCGTGIG MAITANKVKG IRAAQCHDTY SAERARLSND AQIITMGARV IGPELAKAIV RTFLSNEFVN GSSTPKIERI TAYENSPG
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