| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1308 |
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| Symbol | |
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| ID | 3833616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 1542228 |
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| End bp | 1544018 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637825398 |
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| Product | Acyl-CoA dehydrogenase |
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| Protein accession | YP_426396 |
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| Protein GI | 83592644 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.135322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGGAT ACAAGGCTCC CCTGCGCGAC ATGCGCTATG TGCTTTACGA CTTGTTCGAT
GGCGCGTCGC TGACCACCCT TCCCGGGTAC GAGGAGTTCA CCGCCGATCT GATCGATCCG
GTGCTCGAAG AAGCCGCCAA GATTTGCGAA GACGTCCTCC AGCCGCTCAA CCGCCCCGGC
GACGAGGAGG GCTGCGTTCT GGAAAACGGC GTCGTCCGTA CCCCCAAGGG CTTCCCCGAG
GCTTACCGGA CCTTCCGCGA GGGCGGCTGG ACCTCGATCA CCTGCGATCC CGCCCACGGC
GGCCAGGGCC TGCCCCAGGT GGTCAACACC TTCATCGAAG AGATGATCTG CGCCGCCAAT
CTGTCGTTTG GCATGTATCC CGGGCTGTCG CATGGCGCCT ATGTGGCGCT CAAGCAGTTC
GGCACCGAAG ATCAGAAGGC CCGTTATCTG CCGGCCCTGG TCGATGGCAC CTGGACGGGC
ACCATGTGCC TGACCGAACC CCAGTGCGGA ACCGACCTGG GGCTGTTGCG CACCAAGGCG
GTGCCCGATG GCGAGGGCGG CTATAAGATC ACCGGCACCA AGATCTTCAT CTCGGCGGGC
GATCACGACC TGACCGAGAA TATCCTGCAT CTGGTGCTGG CCCGCCTGCC CGACGCCCCC
AAGGGCATCA AGGGCATCAG CCTGTTCCTG GTGCCCAAGG TCCTGGTTAC CGAGGAAGGC
GCCCTTGGCG ACCGCAACGC CGTGACCTGC GGCGCCCTCG AACACAAGAT GGGGATCAAG
GCGTCGTCGA CCTGCGTGCT CAATTTCGAC GAGGCGACGG GCTGGCTGAT CGGCGAGCCG
CATAAGGGCA TGCGGGCGAT GTTCGCCATG ATGAACACCG CCCGCCTGGG CGTCGGCGTT
CAGGGTCTGG GGCTGGCCGA GGCGTCTTAT CAGGGCGCCG TGGCCTATGC CCGCGACCGC
CTGCAGGGCC GCTCGCCCAG CGGCGTCAAG GCGCCCGACA AGCCCGCCGA TCCGCTGATC
GTCCATCCCG ACGTGCGGCG GATGCTGCTC ACCCAGCGCG CCATCGTCGA AGGCGGACGG
GCCCTGGCCG CCTGGGTCGG TCTGGCCCTT GATCGCCAGC ACCACGCCGG CGATCCCGCC
ACCCGCGCCG AGGCCGGCGA ATTCGTCGCC CTGATGACCC CGGTGGTCAA GGCGCTGCTC
ACCGATCTGG GCAGCGAGGC GACCAATCTG GGCGTTCAGG TCTTTGGCGG CCATGGCTAC
ATCCGCGAGC ACGGCATGGA GCAATATATC CGCGACTGCC GGATCACCCA GATCTACGAG
GGCACCAACG GCATCCAGGC CCTGGATCTG GTGGGGCGCA AATTGCCCGA GAACGCCGGG
CGCAACCTGC GGCGCTTCTT CCATCCGGTC GCCGATTACA TCGAGGCCCG CCTTGATGAC
GACACCCTGG CCGAATTCGT CGGACCGCTG GCCAAGACCT TCGTCCGCCT CCAGCAGGCC
ACGGCCCAGG TGGCGCGCGT CGGTATGACC AAACCCGCCG AAGCCGCCGC CGCCGCCACC
GATTACCAGC GCCTGCTTGG CTTTACCGCG CTGGCCTATC TTTGGGCGCG CATGGCCGAG
CTATCGCTGC CCAAGGCCGG CACCGCCGAG GATAACGACG CCTTCCACAG CGCCAAGGTG
GCGACGGCCC GCGTGTTCAT GGAACGCCTG CTGCCCCAGA CCAGCGGCCT GTTCGCCACC
ATCATGGCCG GCGGCCGCAG CCTGGAGGCC TTCCCCGACG CCGCCTTCTG A
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| Protein sequence | MAGYKAPLRD MRYVLYDLFD GASLTTLPGY EEFTADLIDP VLEEAAKICE DVLQPLNRPG
DEEGCVLENG VVRTPKGFPE AYRTFREGGW TSITCDPAHG GQGLPQVVNT FIEEMICAAN
LSFGMYPGLS HGAYVALKQF GTEDQKARYL PALVDGTWTG TMCLTEPQCG TDLGLLRTKA
VPDGEGGYKI TGTKIFISAG DHDLTENILH LVLARLPDAP KGIKGISLFL VPKVLVTEEG
ALGDRNAVTC GALEHKMGIK ASSTCVLNFD EATGWLIGEP HKGMRAMFAM MNTARLGVGV
QGLGLAEASY QGAVAYARDR LQGRSPSGVK APDKPADPLI VHPDVRRMLL TQRAIVEGGR
ALAAWVGLAL DRQHHAGDPA TRAEAGEFVA LMTPVVKALL TDLGSEATNL GVQVFGGHGY
IREHGMEQYI RDCRITQIYE GTNGIQALDL VGRKLPENAG RNLRRFFHPV ADYIEARLDD
DTLAEFVGPL AKTFVRLQQA TAQVARVGMT KPAEAAAAAT DYQRLLGFTA LAYLWARMAE
LSLPKAGTAE DNDAFHSAKV ATARVFMERL LPQTSGLFAT IMAGGRSLEA FPDAAF
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