Gene Rru_A1283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1283 
Symbol 
ID3833591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1510692 
End bp1511870 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content62% 
IMG OID637825373 
Productmembrane-bound tetrahaem cytochrome TorC/YecK 
Protein accessionYP_426371 
Protein GI83592619 
COG category[C] Energy production and conversion 
COG ID[COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit 
TIGRFAM ID[TIGR02162] trimethylamine-N-oxide reductase c-type cytochrome TorC 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAGC GCATCTGGAC TGTTGTATGG AAGCCCAGCG CCCGCTGGGG ATTGGGTGTT 
CTTCTGATCG TTGGCGCGGT GGGCGGCGTG GTGGGCTGGA ACGTGTTCCA TGGCGCGCTT
GAACACACGA ATTCGATCGA ATTCTGTATT TCCTGCCATA CGATGGAGAA TACGGTTTTC
CAGGAATACA AACAAAGCCC CCACTATAAG AACGCCTCGG GCGTGCGCGC CGGCTGTCCG
GATTGCCACG TGCCCAAGGA AGGTCTGCCG CTGTACGCAG CCAAGTTGAG GGCGTCGAAG
GACGTTTACC ACGAGATCCT GGGGACGATT GACACCCCCC AGAAATTCGA GGATCGCCGC
CTGGAGATGG CCCAAAGGGT TTGGGCGCGC ATGGAAGAGA CCGATTCGCG CGAATGCCGG
TCGTGCCATT CCTACGACTC GATGGACTTC CACGCTCAGA AGCCCAAGGC GGCGGCGATG
ATGGAAAAGG CCATGGGCGA GGGGGAAACC TGCATCGCCT GCCACAAGGG CATCGCCCAC
AAGCTTCCCG ATATGTCGGC GGGCTACAAG AAGACTTTCG CCAATTTGCA AGCCCTGGCG
GCCAAGGAAG GCGCCAAGGC CAAGACCCTG ATCAATCTTG ATACCAAGCC GCTGTTTCTT
GACCGCGCCA CGGCGAGCGC CGGCGGCAAG GGCGATGGCA AGCTGCTGTC GGGCAGCGAG
GTCGCCGTTG CCGAGCGGGA TGGCGACTGG CTGAAGGTGA CGGTGTCGGG CTGGCAGCAG
GAAGGCGCCG AGCGGGTGAT CTACGCCCTC AAGGGCCAGC GCATCTTCAC CGCCGCGCTT
GACGCCTCGG CCACGGCGGC GGTCACCGTC ACCGAAACCG TCGTCGATGC CGATACCGAG
CTGACCTGGA AAAAGGTGAC GCTGCAGGCT TGGCTGTCGA AGGACGCCAT GTTGGGCGAT
AGCGACAAGC TGTGGGCCTA TGGCAAGGAG ATGTACGGCG CCGCCTGCGG CACCTGCCAT
TCCCTGCGCG CCCCCGATCA CTTCCTGGCC AACCAGTGGA TCGGCACCCT GAAGGCGATG
AAGCGCTTCG TCAGCCTTGA TGATGAGCAG TACCGCTTCT TGCAGAAGTA CCTCCAGCTT
AACGCCAAGG ATACTGGCGG GGCCGGGGCC CATGGGTAA
 
Protein sequence
MIKRIWTVVW KPSARWGLGV LLIVGAVGGV VGWNVFHGAL EHTNSIEFCI SCHTMENTVF 
QEYKQSPHYK NASGVRAGCP DCHVPKEGLP LYAAKLRASK DVYHEILGTI DTPQKFEDRR
LEMAQRVWAR MEETDSRECR SCHSYDSMDF HAQKPKAAAM MEKAMGEGET CIACHKGIAH
KLPDMSAGYK KTFANLQALA AKEGAKAKTL INLDTKPLFL DRATASAGGK GDGKLLSGSE
VAVAERDGDW LKVTVSGWQQ EGAERVIYAL KGQRIFTAAL DASATAAVTV TETVVDADTE
LTWKKVTLQA WLSKDAMLGD SDKLWAYGKE MYGAACGTCH SLRAPDHFLA NQWIGTLKAM
KRFVSLDDEQ YRFLQKYLQL NAKDTGGAGA HG