Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1215 |
Symbol | |
ID | 3833713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 1435699 |
End bp | 1437099 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637825304 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_426303 |
Protein GI | 83592551 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00663567 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGATT TTGATGTCGT GGTGATCGGT GGCGGCCCGG GCGGCTACGT CTGTGCCATC CGCGCCGCTC AGCTTGGCCT GCGGGTCGCC TGTGTCGAAA AGCGCCCGAC GCTTGGCGGC ACCTGCCTGA ATGTCGGCTG CATTCCGTCC AAGGCGCTGT TGCAGTCGTC GCACCTGTTC GACGAGGCCA ACCACGGCTT CGCCGCCCAT GGCATCACCG TCGGCACCCT GGGCCTCGAC ATGAAGACGA TGATGGCGCG CAAGGACGAG GTGGTCGAGG CCAACACCAA GGGCATCGTT TTCCTGTTCA AGAAGAACAA GGTGACCCAT GTCGTCGGCT CCGCCCGCAT CGCCGGCGCC GGTCAGGTGG TGGTGAGCGG CGAGGGCGGC GAGCAGACGC TGACGACGCG CGCCATCGTC ATCGCCACCG GTTCGGAAGT CACGCCTTTG CCCGGAGTGA CCATCGACGA GGAGCGGATC GTCTCCTCGA CCGGGGCGCT GGCCCTGGCC AAGGTGCCCA AATCCCTGGT GGTGATCGGC GCCGGGGTGA TCGGCCTGGA ATTGGGCTCG GTCTGGCGCC GCCTGGGCGC CGAGGTGACG GTTGTCGAAT ATCTCGACCA CATCCTGCCG CCGATGGATG GCGAGGTGCG CAAGCAAAGC CAGCGCATCC TGGAAAAGCA GGGACTGCGC TTCAAGCTGG GCCGCAAGGT GACGGCCGCC GAACGCAAGG GCGAGGGGGT TAGTCTGACC GTCGAGCCGG CCAAGGGCGG CGAGGCCGAA ACCCTGGAAG CCGAAACCGT GCTGGTCGCC GTTGGCCGCC GGCCCTTTAC CGACGGGCTG GGGCTTGAAG AGGTCGGCGT GGAAAAGACC GATCGCGGCT TCGTCAAGGT CGATGGCGAT TTCCAGACCG CTATCGAAGG CATCTTCGCC ATCGGCGATG TGATCGGCGG CATGATGCTG GCCCATAAGG CCGAGGACGA GGGCATGGCC CTGGCCGAGA TGCTGGCCGG GGAAAGCGCC CATGTGAACT ACGGCGCCAT TCCGTCGGTT GTCTACACCT GGCCGGAAAT CGCCGGGGTC GGCAAGACCG AGGAGATGCT GAAGAAGGAC GGCGTCGCCT ATAAGGTCGG CAAATTCCCC TTCACCGCCA ATGCCCGGGC CAAGGCCAAT GGCGACACCG ACGGCTTCGT CAAGATCCTG TCGAACGCCG AAACCGGCCG GGTGCTTGGC TGCCATATCA TCGGCGCCCA GGCCGGCGAT CTGATCATGG AAGTGGTTTT GGGGATGGAA TTCGGCGCCT CGTCCGAAGA CATCGCCCGC ACCTGCCACG CCCACCCGCA ATTGGGCGAA GCGGTCAAGG AAGCCGCCCT CGCCGTCAAC AAGCGCACCA TCCATATGTG A
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Protein sequence | MSDFDVVVIG GGPGGYVCAI RAAQLGLRVA CVEKRPTLGG TCLNVGCIPS KALLQSSHLF DEANHGFAAH GITVGTLGLD MKTMMARKDE VVEANTKGIV FLFKKNKVTH VVGSARIAGA GQVVVSGEGG EQTLTTRAIV IATGSEVTPL PGVTIDEERI VSSTGALALA KVPKSLVVIG AGVIGLELGS VWRRLGAEVT VVEYLDHILP PMDGEVRKQS QRILEKQGLR FKLGRKVTAA ERKGEGVSLT VEPAKGGEAE TLEAETVLVA VGRRPFTDGL GLEEVGVEKT DRGFVKVDGD FQTAIEGIFA IGDVIGGMML AHKAEDEGMA LAEMLAGESA HVNYGAIPSV VYTWPEIAGV GKTEEMLKKD GVAYKVGKFP FTANARAKAN GDTDGFVKIL SNAETGRVLG CHIIGAQAGD LIMEVVLGME FGASSEDIAR TCHAHPQLGE AVKEAALAVN KRTIHM
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