| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1213 |
|---|
| Symbol | sucA |
|---|
| ID | 3833711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 1431270 |
|---|
| End bp | 1434233 |
|---|
| Gene Length | 2964 bp |
|---|
| Protein Length | 987 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637825302 |
|---|
| Product | 2-oxoglutarate dehydrogenase E1 component |
|---|
| Protein accession | YP_426301 |
|---|
| Protein GI | 161777626 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.326546 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGACG ACGTGGAAAC GTCTTTTCTG ACCGGAGCCA ACGCGGTCTA TATCGCCGAA
GTCTACAGCC GCTACCTTGC CGATCCGTCC TCCGTCGATC CAAGCTGGGT CGCCTTTTTC
GGCGAATTGC GCGATGGCGC CGAGGAACTG AGCGGTGATC TCAAGGGACC TTCGTGGACC
TCGCGGGGGA ACGCGGTGAT CGGCACCGCC GATCCCGACG CCCCCGCCGC CGCCAAGGCC
GGGAAAAACG GCAAGGCCGC CGCCGCTCCG GTCCCCGCCG CTCCGGCCGC CGCCGGTCTC
TCCACCGCCG AAGTCCGCGC CCACACCCTG GATTCCGTGC GCGCCCTGAT GATGATCCGC
GCCTATCGGG TGCGCGGCCA TCTGGTCGCC GACCTTGATC CGCTTGGCTT GAACAAGAAC
AACGAGCATC CCGAGCTCGA CTACCGCAGC TACGGCTTCA CCGATGCCGA TCTCGAGCGC
GAGATCTTCA TCGATAACGT GCTGGGCATG GAAAGCGCCA CCCTGCGCAA GATCGTCGAG
GTCGTCCGCG AAACCTATTG CGGCACCATC GGCGTCGAGT TCATGCATAT TCAAGATCCC
GAGCAAAAAA GCTGGATCCA ACGCCGCATC GAGGGCGAGC GCAACCACAC CCGCTTCACT
CCCGAGGGCA AGAGGGCCAT CCTGGAACGG CTGACCGAGG CCGAGGGCTT CGAGAAGTTC
CTCCAGGTCA AATATACGGG CACCAAGCGC TTCGGCCTGG AAGGCGGCGA GACGGTCATT
CCGGCGATCG AGCAGATCCT CAAGCGCGGC AGCCAGCTTG GCCTGACCGA CATCAATCTG
GGCATGGCCC ATCGCGGCCG GCTCAATCTG CTGACCTCGC TGCTGCATAA GCCCTATCGG
GCGATCTTCA GCGAGTTCCA GGGCAATAGC GCCAATCCCG ATGACGTTCA GGGCTCGGGT
GACGTGAAGT ACCATCTGGG CACCTCGGCC GATCGTGAAT TCGATGGCGC GGTCGTCCAT
CTGTCGCTGC AGGCCAATCC ATCCCACCTG GAAGCCGCCG ACCCGGTGGT GCTGGGCAAG
GTGCGGGCCA AGCAGACCCA GCTTGGCGAT ACGGATCGCA AGGCGGTGAT GGCGCTGCTG
ATCCACGGCG ACGCCGCCTT CGCCGGCCAG GGGCTGGTCG CCGAATGTTT CGGCCTGTCC
CAGCTCAAGG GCTATCGCAC CGGCGGCACC ATTCACATCG TCATCAACAA CCAGATCGGC
TTCACCACCA GCCCGCAGTA CAGCCGTTCG GGCCAGTATT GTACCGATAT CGCCAAGATG
GTTCAGGCGC CGATCTTCCA CGTCAATGGC GACGACCCCG AGGCGGTGGT GCATACGGCG
CGCATCGTCA CCGAATTCCG CCAGGAGTTC GGCGTCGATG TCGTGCTCGA CATGGTGTGT
TATCGCCGCC ATGGCCATAA CGAAAGCGAC GAGCCGGCCT TCACCCAGCC CTTGATGTAT
GACTCGATCG CCCATCGCCA GACCACCCGC ACGCTTTATG CGCAAAAGCT GGTGAGCGAG
GGGCTGATCT CGCAGGCCGA GGCCGATGGT CTGGCCGACG CCTTCACCGC CCGCCTGGAA
ACCGAGTTCC AGGCCGCCAC CAGCTATAAG CCCAATCGCG CCGATTGGCT GGCGGGCAAA
TGGGAAGGGC TGGAGGCGCT GAACGGCGAA GAGGAATTCC GCCAGGACCG GACCGAGGTG
CCGGCCGAGG TTCTGCGCCG GGTCGGCACG GCGCTGTCGA CGCCGCCGGA AAACTTCGAC
ACCAACCGCA AGATCCTGCG CCAGATGAAG GCCAAGGCCG AGATGCTGGA AACCGGCCAG
GGCATCGACT GGGCGACCGC CGAGGCCCTG GCTTTCGGCA CCTTGCTGCT GGAAGGCACG
CGGGTGCGGT TGTCGGGCCA GGATTCGGGG CGCGGCACCT TCTCGCACCG CCATTCGGTG
CTGATCGACC AGACCAACGA GAACCGCCAC ATCCCGCTTG ACCACCTTGA TCCCGCCCAG
GCGCGGTTCG AGGTGATCGA CAGCCCGCTG TCGGAATTCT CGGTGTTGGG GTTCGAATAC
GGCTATTCGC TGGCCGAGCC CAAGGCCCTG GTGCTGTGGG AGGCCCAGTT CGGCGATTTC
GCCAATGGCG CCCAGGTGAT CTTCGACCAG TTCATCAGCT CGGCCGAAAG CAAGTGGCTG
CGCATGTCGG GGCTGGTCTG CCTGCTGCCC CATGGCTATG AGGGCCAGGG CCCCGAGCAT
TCCTCGGCCC GGCCCGAGCG CTATCTGCAG CTCTGCGCCG AAGACAACAT GCAGGTGGTC
AACATCACCT CGCCGGCCAA TTATTTCCAC GCCCTGCGCC GGCAGGTCCA CCGCAACTTC
CGCAAGCCGC TGATCGTCAT GGCGCCCAAA TCGCTGCTGC GTCATAAGCT GGCGGTCAGC
CCGCTGTCGG ATTTCACCGA TCACGGCTTC CGCCGGGTGC TGCCCGAGAC CAAGACCCTG
GTCGAGGACG ACAAGATCAC CCGGGTGGTG CTGTGTTCGG GCAAGGTCTA TTACGACCTG
TATCAGGCCC GCGAGGACCA GGGCATCGAC GATGTCGCCA TCGTCCGCAT CGAGCAGTTG
TATCCCTGGC CCAAGGACAC CTTGATGAAG GTGCTCAAGC GCTATCCCAA CGCCGATGTG
GTGTGGTGCC AGGAAGAGCC GGCCAATATG GGCTATTGGA CCTTCGTCGA CCGCCGCATC
GAGTTCTTCC TGCAGGAACT CGAGCATCGC CCCGGCCGGG CCAGCTATGC CGGCCGTCCG
GCCGCCGCCT CGCCGGCCAC CGGGTCCAAT CGCGGCCATG GGCGCGAGCA GGCCTTGCTG
GTTGAACAGG CCCTGACCTG GAAGCGCGAT GTCCTGCCCC AGCCGTTCCG CCGCGCCACC
AAGCTCAGCA TCATCGGGCA GTGA
|
|---|
| Protein sequence | MGDDVETSFL TGANAVYIAE VYSRYLADPS SVDPSWVAFF GELRDGAEEL SGDLKGPSWT
SRGNAVIGTA DPDAPAAAKA GKNGKAAAAP VPAAPAAAGL STAEVRAHTL DSVRALMMIR
AYRVRGHLVA DLDPLGLNKN NEHPELDYRS YGFTDADLER EIFIDNVLGM ESATLRKIVE
VVRETYCGTI GVEFMHIQDP EQKSWIQRRI EGERNHTRFT PEGKRAILER LTEAEGFEKF
LQVKYTGTKR FGLEGGETVI PAIEQILKRG SQLGLTDINL GMAHRGRLNL LTSLLHKPYR
AIFSEFQGNS ANPDDVQGSG DVKYHLGTSA DREFDGAVVH LSLQANPSHL EAADPVVLGK
VRAKQTQLGD TDRKAVMALL IHGDAAFAGQ GLVAECFGLS QLKGYRTGGT IHIVINNQIG
FTTSPQYSRS GQYCTDIAKM VQAPIFHVNG DDPEAVVHTA RIVTEFRQEF GVDVVLDMVC
YRRHGHNESD EPAFTQPLMY DSIAHRQTTR TLYAQKLVSE GLISQAEADG LADAFTARLE
TEFQAATSYK PNRADWLAGK WEGLEALNGE EEFRQDRTEV PAEVLRRVGT ALSTPPENFD
TNRKILRQMK AKAEMLETGQ GIDWATAEAL AFGTLLLEGT RVRLSGQDSG RGTFSHRHSV
LIDQTNENRH IPLDHLDPAQ ARFEVIDSPL SEFSVLGFEY GYSLAEPKAL VLWEAQFGDF
ANGAQVIFDQ FISSAESKWL RMSGLVCLLP HGYEGQGPEH SSARPERYLQ LCAEDNMQVV
NITSPANYFH ALRRQVHRNF RKPLIVMAPK SLLRHKLAVS PLSDFTDHGF RRVLPETKTL
VEDDKITRVV LCSGKVYYDL YQAREDQGID DVAIVRIEQL YPWPKDTLMK VLKRYPNADV
VWCQEEPANM GYWTFVDRRI EFFLQELEHR PGRASYAGRP AAASPATGSN RGHGREQALL
VEQALTWKRD VLPQPFRRAT KLSIIGQ
|
|---|
| |