Gene Rru_A1188 details

Gene Information

• Locus tag: Rru_A1188
• Symbol: rplS
• ID: 3834698
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: +
• Start bp: 1405566
• End bp: 1406057
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637825277
• Product: 50S ribosomal protein L19
• Protein accession: YP_426276
• Protein GI: 83592524
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0335] Ribosomal protein L19
• TIGRFAM ID: [TIGR01024] ribosomal protein L19, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.186255
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACATTA TCGAGCAGTT CGAGAAGGAG CAGATCGAGA AGCTCCTGGA ACAGCGGGGC 
GTGCCCCAGT TTTCCCCGGG CGACACCCTT CGCGTTCACG TGAAGGTTAT CGAAGGCAAC 
CGTCAGCGCG TTCAGGTCTA CGAAGGCGTC TGCATCGCCC GGCGCAATGC CGCGCTGAAC 
TCGTCCTTCA CCGTGCGCAA GATCTCGTTT GGCGAAGGCG TTGAGCGTAT TTTCCCGCTC 
TATGCCCCGA CCATCGACCG CATCGAAGTG GTGCGTCGCG GTAAGGTCCG TCGCGCGAAG 
CTGTACTACC TGCGTGGCCG TCAGGGCCGT TCGGCGCGTA TCATCGAGGA TACGACGGCG 
ACCCAGCAGG CTTTGGCCGT CGAGCGCGAG ATCAGCCAGG AGCGCAAGGC TTCGGGCAAG 
GACCAGGCCA GCAAGCCCGA GGTCCGGCCC CAGGGCAAGA AGCCCGCGCC CAAGCCCAAG 
GCCAAGAAGT AA 

 

Protein sequence

MNIIEQFEKE QIEKLLEQRG VPQFSPGDTL RVHVKVIEGN RQRVQVYEGV CIARRNAALN 
SSFTVRKISF GEGVERIFPL YAPTIDRIEV VRRGKVRRAK LYYLRGRQGR SARIIEDTTA 
TQQALAVERE ISQERKASGK DQASKPEVRP QGKKPAPKPK AKK