Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1176 |
Symbol | |
ID | 3834686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 1391734 |
End bp | 1392762 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637825265 |
Product | histone deacetylase superfamily protein |
Protein accession | YP_426264 |
Protein GI | 83592512 |
COG category | [B] Chromatin structure and dynamics [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGTGT TCTTTTCCCC CCGCCAGCTT GCCCACGCTC CCGCTTCGGA GTTCTCGCGC GGCGAAATGA TCGCCTTTCG CGAATGCCCC GTCCGCGCCC AATCGATCCT GGCGGCGCTG GCGGCCGCGG GGTTTCCCGC CCCGAGCCAG CCGGTCGATC CCGGGCTTGC CCCGGTGCTG GCGATCCACG ACGGCGAGTA TGTCGAGTTC CTGCGAACGG CCTGGACGCG CTGGCGGGCG GGCGGAGCGA CCGTCGCCGC CTATCCCACC GCTTGGCCGG TGCCCGGGAT TGGCGAGCGG CGCCCCGACA CGGTGGAGGG CCTGCTTGGC TGGTATATTT TTGATTCGGG TACGCCGATC GTCGCCGAGA CCTGGGATGC GGTCAAAGCC GGGGCCGATA CCGCCCATGC CGGGGCCCTG GCCGTGGCCA CCGGCGCCCA CTCGGCCTTC GCCCTCTGTC GGCCGCCGGG GCATCACGCC GCCCGCGCCC TGGCGGGGGG CTATTGCTAT CTGAACAACG CCGCCATCGC CGCCCAGACC CTGCGCGACC AGGGGGCGGG GCGGGTGGCG ATCCTTGATG TCGATTACCA CCATGGCAAT GGCACCCAGG AGATCTTCTA CGAGCGCGGC GATGTGCTGT TCGTCTCGCT CCACGCCGAT CCGGCCTTTG GCTATCCCTA TTACACCGGC TATGGCGACC AGAGCGGTCG CGGGGCGGGC GAGGGGACGA CGCTCAACCT GCCGCTGGCC GCCGGAACGA CCGAAGCGGA ATGGCTGGCG GCCCTGGAGC ATGGGCTGGC CCGTTTGGGC GAATTCGCTC CCGACGCCGT GGTGGTGTCG CTGGGCGTGG ACACCTGGGC AGGCGATCCC CTGTCGCACT TCAAGGTGTC CGCCCGCGCC TTCCCCGCCC TTGGCGCCCG CTTGGCCGGG CTTGGTCTTC CCACCCTGTT CGTGATGGAG GGCGGTTATG CCACGGCAGA GTTGGGTAAG AACGTTGTGG GGGTTTTATC GGGATTTGAG GACGCTTGA
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Protein sequence | MRVFFSPRQL AHAPASEFSR GEMIAFRECP VRAQSILAAL AAAGFPAPSQ PVDPGLAPVL AIHDGEYVEF LRTAWTRWRA GGATVAAYPT AWPVPGIGER RPDTVEGLLG WYIFDSGTPI VAETWDAVKA GADTAHAGAL AVATGAHSAF ALCRPPGHHA ARALAGGYCY LNNAAIAAQT LRDQGAGRVA ILDVDYHHGN GTQEIFYERG DVLFVSLHAD PAFGYPYYTG YGDQSGRGAG EGTTLNLPLA AGTTEAEWLA ALEHGLARLG EFAPDAVVVS LGVDTWAGDP LSHFKVSARA FPALGARLAG LGLPTLFVME GGYATAELGK NVVGVLSGFE DA
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