| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1162 |
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| Symbol | |
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| ID | 3834672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 1379541 |
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| End bp | 1381331 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637825251 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_426250 |
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| Protein GI | 83592498 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.122791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTGA CGACGCCCAA CGGCTTCACA TTGAACGATG CCGGCCGCCG CGTGGTGGTC
GATCCGGTGA CCCGCATCGA GGGTCATCTG CGCATCGAGC TCAATGTCGA CGAGGCCAAT
GTCATCCGCA ACGCCGTGTC GACGGGAACG ATGTGGCGCG GCATCGAACT GATCCTCAAG
GGCCGCGATC CGCGCGACGC CTGGGCCTTT ACCCAGCGCA TCTGCGGGGT GTGCACGGGA
ACCCACGCCC TGACCAGCGT GCGTGCCATC GAAAACACCC TTGGCATCCA GATCCCCGAA
AACGCCAATT CCATCCGCAA CATCATGCAG CTTTGCCTGC AGGTGCATGA CCATCTGGTT
CACTTCTATC ACCTGCATGC CCTGGATTGG GTCGATGTGG TTTCGGCGCT TTCGGCCGAT
CCGAAAGCCA CCAGCGCCCT GGCGCAAAGC CTGTCGCCCT GGCCGCTGTC CTCGCCCGGC
TATTTTAGCG ACATCAAGGC CAAGCTGACC CGTTTCGTCG AATCCGGGCA GTTGGGGCCG
TTCAAGAACG GCTATTGGGG CCACCCGGCC TATCGCCTGC CGCCCGAAGC CAATCTGATG
GCGGTCGCCC ATTATCTGGA GGCGCTGGAT TTCCAGAAGG AGATCGTCAA GATCCATGCG
GTCTTCGGCG GCAAGAACCC CCATCCCAAC TGGCTGGTCG GCGGCGTGCC CTGCGCCATC
AACCTTGATG GCGCCGGCGC CGTCGGCGCA GTCAATATCG AGCGGCTCAA TCTGGTGTCG
TCGATCATCG ACCGCGCCAC CACCTTCGTC GAACAGGTCT ATCTGCCCGA TCTGATCGCC
ATCGCCGGCT TCTATAAGGA CTGGCAGTAT GGCGGCGGCC TCAGTTCCAC CTCGGTGCTG
GCCTATGGCG ATATCCCCGA TCGCGCCAAT GATTATTCGC CTTCGAACCT TTTGATGCCG
AGCGGGGCGA TCATCAATGG CGAACTGACC CGCATCCATC CGGTTGATCT GACCGACCCC
GAGCAGATCC AGGAGTTCGT TTCCCATTCC TGGTACCGCT ATGGCGACGA GGCCAAGGGA
TTGCACCCCT GGGATGGCGT CACCGAAAGC CACTTCGAGC TGGGGCCGCG CAGCAAGGTC
GAAAACCGGC GCATCGAGAC CCTCGATGAA AGCGCCAAAT ACAGCTACCT CAAGGCGCCG
CGCTGGCGGG GCCATGCCAT GGAGGTCGGG CCGCTCGCCC GCTATATCCT GGGCTATGCC
CAGGGCAATC CCGAGTTCAA GGAGCCGACC GAGGCCCTGT TGCGCCAGCT TGACCTGCCG
GTCGGCGCCT TGTTCTCCAC CCTGGGGCGG ACGGCGGCGC GCGGCCTGGA ATGCCAATGG
GCGGCGGGCA AGCTGCGCTA TTTCTTCGAT AAACTGATGG CCAACCTCAA GGCCGGCGAT
CTCAACACCG CCAATACGAC GAAATGGGCG CCCGCCACTT GGCCAGCTTC GGCCAAAGGT
GTGGGCTTTA CCGAAGCGCC GCGCGGCGCC CTGGCCCATT GGGTCCAGAT CGAGGCGGGC
AAGATCGCCA ATTACCAATG CGTGGTGCCG ACCACCTGGA ACGGCAGTCC GCGCGATCCG
GCGGGGGCGA TCGGCGCCTT CGAGGCGGCC TTGCTCGATA CGCCGCTGGC CGATCCCCAA
CAGCCGCTTG AAGTGCTGCG GACCCTGCAC AGCTTTGACC CCTGCCTCGC CTGTTCGACC
CATATCCTGA CGCCCGAGGG CGGCGAGGCG ATTTCGGTGA CGGTGCGCTA A
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| Protein sequence | MSVTTPNGFT LNDAGRRVVV DPVTRIEGHL RIELNVDEAN VIRNAVSTGT MWRGIELILK
GRDPRDAWAF TQRICGVCTG THALTSVRAI ENTLGIQIPE NANSIRNIMQ LCLQVHDHLV
HFYHLHALDW VDVVSALSAD PKATSALAQS LSPWPLSSPG YFSDIKAKLT RFVESGQLGP
FKNGYWGHPA YRLPPEANLM AVAHYLEALD FQKEIVKIHA VFGGKNPHPN WLVGGVPCAI
NLDGAGAVGA VNIERLNLVS SIIDRATTFV EQVYLPDLIA IAGFYKDWQY GGGLSSTSVL
AYGDIPDRAN DYSPSNLLMP SGAIINGELT RIHPVDLTDP EQIQEFVSHS WYRYGDEAKG
LHPWDGVTES HFELGPRSKV ENRRIETLDE SAKYSYLKAP RWRGHAMEVG PLARYILGYA
QGNPEFKEPT EALLRQLDLP VGALFSTLGR TAARGLECQW AAGKLRYFFD KLMANLKAGD
LNTANTTKWA PATWPASAKG VGFTEAPRGA LAHWVQIEAG KIANYQCVVP TTWNGSPRDP
AGAIGAFEAA LLDTPLADPQ QPLEVLRTLH SFDPCLACST HILTPEGGEA ISVTVR
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