Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1161 |
Symbol | |
ID | 3834671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 1378441 |
End bp | 1379526 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637825250 |
Product | Ni-Fe hydrogenase, small subunit |
Protein accession | YP_426249 |
Protein GI | 83592497 |
COG category | [C] Energy production and conversion |
COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA) [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGGAAA CCGAGACCTT TTACGAGGTC ATCCGTCGCC AGGGGATTTC CCGGCGCGGC TTCTTGAAGT TCTGCGGTGT CACCGCCGCC GGGCTGGGCC TGGGCGCCGG CGGCGCGGCG CGCATCGCCC AGGCGCTGGA AACCAAGCCA CGGGTGCCGG TGATCTGGCT GCATGGCCTG GAATGCACCT GTTGTTCGGA AAGCTTCATC CGCTCGGCCC ATCCGCTGGT CAGCGACGTG GTGCTGTCGA TGCTGTCGCT CGATTACGAC GACACGCTGA TGGCCGCCGC CGGTCATCAG GCCGAGGCGA TCCTGGCCGA GACCCGCGAG ACCTATCGCG GGCGCTATAT CCTGGCGGTC GAGGGCAACG CGCCGCTGGC CAATGACGGC TTTTTCTGTA TGCCCGGCGG TCGGCCCTTC GTTGATACCC TGAAGGAAAT GGCCGCCGAC AGCGCCGCCG TCATCGCCTG GGGATCGTGC GCCAGTTGGG GCTGCGTTCA GGCGGCCAAG CCCAATCCCA CCGGGGCGGT GCCGATTGAT CAGGTGATCA CCGGCAAGCC GCTGATCAAG GTGCCGGGCT GTCCGCCGAT CGCCGAGGTG ATGACCGGGG TGATCAGCTA CCTGCTGACC TTCGACCGCT TCCCCGAGCT TGATCTGCAG GGGCGGCCGA AAATGTTCTA TTCCCAACGC ATCCACGACA AATGTTACCG CCGCGGCCAT TTCGATGCCG GCCAGTTCGT CGAGGCCTTC GACGATGACG CCGCCCGCCG CGGTCACTGT CTGTACAAGA TGGGCTGCAA GGGGCCCACG ACCTACAACG CCTGTTCGAC CACCGGCTGG AACGAGGGCA CCTCGTTTCC CATCCAATCG GGCCATGGCT GCCTGGGCTG TTCAGAGGAT GGCTTTTGGG ACAAGGGGCC GTTCTACGAG CGGTTGTCGA CCATCAATCA GTTCGGGATT GAAGCCAATG CCGACATCGT AGGCGGAACG GCCGCCGGGG TGGTGGCGGC CGGGGTGGCG GCCCATGCCG GCGTCACCGT GGCCCGGCGC CTGATGTCGA AGAACGAAAA CAAAGACAAA GAGTAG
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Protein sequence | MGETETFYEV IRRQGISRRG FLKFCGVTAA GLGLGAGGAA RIAQALETKP RVPVIWLHGL ECTCCSESFI RSAHPLVSDV VLSMLSLDYD DTLMAAAGHQ AEAILAETRE TYRGRYILAV EGNAPLANDG FFCMPGGRPF VDTLKEMAAD SAAVIAWGSC ASWGCVQAAK PNPTGAVPID QVITGKPLIK VPGCPPIAEV MTGVISYLLT FDRFPELDLQ GRPKMFYSQR IHDKCYRRGH FDAGQFVEAF DDDAARRGHC LYKMGCKGPT TYNACSTTGW NEGTSFPIQS GHGCLGCSED GFWDKGPFYE RLSTINQFGI EANADIVGGT AAGVVAAGVA AHAGVTVARR LMSKNENKDK E
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