Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1135 |
Symbol | |
ID | 3833442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 1339162 |
End bp | 1340364 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637825224 |
Product | aminotransferase |
Protein accession | YP_426223 |
Protein GI | 83592471 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.309528 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGATCG TCGCCGAGCG TCTGTCCGCC ATCAAACCGT CGCCGACCCT GGCGGTTACC ACCAAGGCCG CCGAACTCAA GGCCGCCGGC CGTGACATTA TCGGTCTGGG CGCGGGCGAA CCCGACTTCG ATACCCCCGA TCACATCAAA CAGGCGGCGA TCGCCGCCAT CGAGCGCGGC GAGACCAAAT ACACCGCCGT TCCCGGCACC GCCGCCCTGC GCAAGGCGAT CTGCGCCAAG CTCAAGCGCG AGAACGATCT TGAGTACACG ATCGAAGAGA TCAGCGTCGG CTGCGGTGGC AAGCAGACCA TCTACAACGC CCTGATGGCG ACGCTGAACC CGGGCGAGGA GGTGATCATC CCCGCGCCTT ATTGGGTCAG CTATCCCGAT ATCGCCCTGT TGGCCGGCGG CGTGCCGGTG TTCGTTCCCA GCGGCCCCGA GGTCGGCTTC AAGCTGCAGC CCGCCGATCT GGAGCGCGCC ATCACGCCCA AGACCAAATG GCTGATCCTC AACAGCCCGT CCAATCCGAC GGGCGTGGCC TATTCGGCCG CCGATCTCAA GGCCCTGGCC GAGGTTCTGC TCAAGCATCC CCATGTCTGG GTGATGACCG ACGATATGTA CGAGCACCTC GTCTATGACG GCTTCAAGTT CGCCACCATC GCCCAGGTCG AGCCCAAGCT GAAGGACCGC ACCCTGACGC TGAACGGCGT TTCCAAGTCG TTCGCCATGA CCGGCTGGCG CGTCGGCTAT GCCGCCGGCC CGGTGGCGGT GATCAAGGCG ATCAACAAGA TCCAAAGCCA GTCGACCACC CACACCAGCT CGATCAGTCA GGCCGCCGCC CTTGCCGCCC TTGAAGGGCC GATGGACTTC CTGATCGAAC GCAACGCCAT CTTCAAGGAA CGCCGCGATC TGGTCGTGCG CATGATCAAT GATTGCCCGG GCCTGTCGGT CGGCACGCCG GAAGGCGCCT TCTATGTCTA TCCGTCCTGC GCCGGGGTGA TCGGCAAGAC GACGCCCGAG GGCAAGCTGC TGGAAACCGA CAGCGATTTC GTCGCCGCCC TGCTCGAAAG CGAAGGGGTC GCCGCCGTTC AGGGCGTGGC CTTCGGCCTG TCGCCCTATT TCCGCATCAG CTACGCCACG GCGACCGCCA CCCTGGAGGA CGCCTGCCAG CGCATCCGCC GCTTCTGCGA AAGCCTGCGT TGA
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Protein sequence | MSIVAERLSA IKPSPTLAVT TKAAELKAAG RDIIGLGAGE PDFDTPDHIK QAAIAAIERG ETKYTAVPGT AALRKAICAK LKRENDLEYT IEEISVGCGG KQTIYNALMA TLNPGEEVII PAPYWVSYPD IALLAGGVPV FVPSGPEVGF KLQPADLERA ITPKTKWLIL NSPSNPTGVA YSAADLKALA EVLLKHPHVW VMTDDMYEHL VYDGFKFATI AQVEPKLKDR TLTLNGVSKS FAMTGWRVGY AAGPVAVIKA INKIQSQSTT HTSSISQAAA LAALEGPMDF LIERNAIFKE RRDLVVRMIN DCPGLSVGTP EGAFYVYPSC AGVIGKTTPE GKLLETDSDF VAALLESEGV AAVQGVAFGL SPYFRISYAT ATATLEDACQ RIRRFCESLR
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