Gene Rru_A1135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1135 
Symbol 
ID3833442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1339162 
End bp1340364 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content65% 
IMG OID637825224 
Productaminotransferase 
Protein accessionYP_426223 
Protein GI83592471 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.309528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATCG TCGCCGAGCG TCTGTCCGCC ATCAAACCGT CGCCGACCCT GGCGGTTACC 
ACCAAGGCCG CCGAACTCAA GGCCGCCGGC CGTGACATTA TCGGTCTGGG CGCGGGCGAA
CCCGACTTCG ATACCCCCGA TCACATCAAA CAGGCGGCGA TCGCCGCCAT CGAGCGCGGC
GAGACCAAAT ACACCGCCGT TCCCGGCACC GCCGCCCTGC GCAAGGCGAT CTGCGCCAAG
CTCAAGCGCG AGAACGATCT TGAGTACACG ATCGAAGAGA TCAGCGTCGG CTGCGGTGGC
AAGCAGACCA TCTACAACGC CCTGATGGCG ACGCTGAACC CGGGCGAGGA GGTGATCATC
CCCGCGCCTT ATTGGGTCAG CTATCCCGAT ATCGCCCTGT TGGCCGGCGG CGTGCCGGTG
TTCGTTCCCA GCGGCCCCGA GGTCGGCTTC AAGCTGCAGC CCGCCGATCT GGAGCGCGCC
ATCACGCCCA AGACCAAATG GCTGATCCTC AACAGCCCGT CCAATCCGAC GGGCGTGGCC
TATTCGGCCG CCGATCTCAA GGCCCTGGCC GAGGTTCTGC TCAAGCATCC CCATGTCTGG
GTGATGACCG ACGATATGTA CGAGCACCTC GTCTATGACG GCTTCAAGTT CGCCACCATC
GCCCAGGTCG AGCCCAAGCT GAAGGACCGC ACCCTGACGC TGAACGGCGT TTCCAAGTCG
TTCGCCATGA CCGGCTGGCG CGTCGGCTAT GCCGCCGGCC CGGTGGCGGT GATCAAGGCG
ATCAACAAGA TCCAAAGCCA GTCGACCACC CACACCAGCT CGATCAGTCA GGCCGCCGCC
CTTGCCGCCC TTGAAGGGCC GATGGACTTC CTGATCGAAC GCAACGCCAT CTTCAAGGAA
CGCCGCGATC TGGTCGTGCG CATGATCAAT GATTGCCCGG GCCTGTCGGT CGGCACGCCG
GAAGGCGCCT TCTATGTCTA TCCGTCCTGC GCCGGGGTGA TCGGCAAGAC GACGCCCGAG
GGCAAGCTGC TGGAAACCGA CAGCGATTTC GTCGCCGCCC TGCTCGAAAG CGAAGGGGTC
GCCGCCGTTC AGGGCGTGGC CTTCGGCCTG TCGCCCTATT TCCGCATCAG CTACGCCACG
GCGACCGCCA CCCTGGAGGA CGCCTGCCAG CGCATCCGCC GCTTCTGCGA AAGCCTGCGT
TGA
 
Protein sequence
MSIVAERLSA IKPSPTLAVT TKAAELKAAG RDIIGLGAGE PDFDTPDHIK QAAIAAIERG 
ETKYTAVPGT AALRKAICAK LKRENDLEYT IEEISVGCGG KQTIYNALMA TLNPGEEVII
PAPYWVSYPD IALLAGGVPV FVPSGPEVGF KLQPADLERA ITPKTKWLIL NSPSNPTGVA
YSAADLKALA EVLLKHPHVW VMTDDMYEHL VYDGFKFATI AQVEPKLKDR TLTLNGVSKS
FAMTGWRVGY AAGPVAVIKA INKIQSQSTT HTSSISQAAA LAALEGPMDF LIERNAIFKE
RRDLVVRMIN DCPGLSVGTP EGAFYVYPSC AGVIGKTTPE GKLLETDSDF VAALLESEGV
AAVQGVAFGL SPYFRISYAT ATATLEDACQ RIRRFCESLR