Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1117 |
Symbol | |
ID | 3833424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 1312016 |
End bp | 1313119 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637825206 |
Product | secretion protein HlyD |
Protein accession | YP_426205 |
Protein GI | 83592453 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCCGC CCGCGGTCGG CGTCATGACG ATCGAAGCAA GGCCTCTCGC CGTCATGAAT GAACTGCCCG GCCGGATCGC CGCAACACGC GTTTCCGAGG TTCGCGCCCA AGTGTCGGGC ATCCTGCAGG AGCGTGTCTT TACACAGGGC ACGCCCGTCA CGAAAGGGGA CGTTCTCTAT CGGATCGACG CCCGTCTGTT CCGCGCTCGC GTCGCGAGCG CGGAGGCTTC GCTGGCGCGT GCGCGTTCGA CGCTGACAAA CGCCCGTAAC CAGATGTCCC GCCAGGAATC CTTGCGCAAG AGTAACGTCA CCAGCGGGGC TCAATACGAG GCGGCGGTCG CCGCCCTGGA GCAGGCCAAT GCAGACGTCG CCTTTGCGCA AGCCGCCTTG GACGAGGCGA GGATCAATCT CGCCTATACT GACGTGCGAG CGCCGATCAG CGGCATCATC GGCGCGGCCC TGGTCACCGA GGGCGCGTTG GTGACGGCTG ACGGTTCGCA GAATTTAGCG CTGATCCAGC AGATCGACCC GGTTTACGCG GATTTCACGC AGTCGGCGCA GCAGCTTCTC GCCCTCCGGC GTGCTGTCAA CGAAGGCAAG CTGGCGTTTC CGGCTCCCGG CGAAGCCCGT GTCGAACTTC TGTTCGATGA CGACTCGGTC TATTCGAAGC CGGGGCGGCT GCTGTTCGCC AGCGCCAGCG TCGACGCCAC GACCGGCCAG GTGACCCTGC GCGCGGAATT CCCGAACTCA GATGGCGACC TCCTGCCGGG CATGTATGTG CGCGTTCGTG TCGAGCAGGC CGTGCACCAG CATGCCATCA CCATTCCTCA GCGGGCGGTG CTGCGGACGC AAGATGGCCG GGCTCAGGTC TATGTCGTCT CGGCGGACGA TACCGCCGTC GCGCGTGAGG TCAGGCTTGG ACAGGTGCAA AACGATGAGT GGCTCGTCGA AGCCGGGCTG AAAGCCGGCG AGCGCGTGGT TATCGATGGC GTTCAAAAGG TCGTTGCAGG AGGGAAGGTC GCGGCGGAGC CGTGGAATCC TGCCGCCACC AACCAAAAAT CGGCGGCGCA ACAGGAAAGA GCGCCTGACC AACCAGCGCA ATAG
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Protein sequence | MPPPAVGVMT IEARPLAVMN ELPGRIAATR VSEVRAQVSG ILQERVFTQG TPVTKGDVLY RIDARLFRAR VASAEASLAR ARSTLTNARN QMSRQESLRK SNVTSGAQYE AAVAALEQAN ADVAFAQAAL DEARINLAYT DVRAPISGII GAALVTEGAL VTADGSQNLA LIQQIDPVYA DFTQSAQQLL ALRRAVNEGK LAFPAPGEAR VELLFDDDSV YSKPGRLLFA SASVDATTGQ VTLRAEFPNS DGDLLPGMYV RVRVEQAVHQ HAITIPQRAV LRTQDGRAQV YVVSADDTAV AREVRLGQVQ NDEWLVEAGL KAGERVVIDG VQKVVAGGKV AAEPWNPAAT NQKSAAQQER APDQPAQ
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