| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1110 |
|---|
| Symbol | |
|---|
| ID | 3833417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 1305537 |
|---|
| End bp | 1306436 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637825199 |
|---|
| Product | RNA polymerase factor sigma-32 |
|---|
| Protein accession | YP_426198 |
|---|
| Protein GI | 83592446 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
|---|
| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.140858 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACAG TGGCTCCTGG TCTTTCAATC GGTCCTGAAA GCAATTTGAC GCGATATTTG
CAGAACATCC GCAAATTTCC CATGCTTGCC CCCGAAGAAG AATACACCCT CGCCCAGCGC
CTGCGCGATT CGGGCGACTC CGAAGCGGCC CACCGTCTGG TGACCAGCCA TCTGCGTCTC
GTCGCCAAGA TCGCCATGGG CTACCGCGGA TATGGTCTGC CGATGGGCGA GGTCATCAGC
GAGGGCAACG TCGGCCTGAT GCAGGCGGTG AAACGCTTCG ATCCCGAGCG CGGCTTCCGT
CTGGCCACCT ATGCTATGTG GTGGATCCGC GCCGCGATCC AAGAGTACAT CCTGCATTCC
TGGTCGCTGG TCAAAATGGG CACGACCGCC GCCCAGAAAA AGCTGTTCTT CAATCTGCGC
AAGATGAAGG GCCAGCTTCA ATTGATGGAC GAAGGCGACA TGCATCCCGA CAAGGTCACC
CAGATCGCCA CCAAGCTGGG GGTGCCCGAG CAGGATGTCA TCAACATGAA TCGCCGGCTG
TCGAGCCCCG ACCACTCGCT CAACGCCCCC GTACGGATGG ATGGCGATGG CGAATGGCAG
GATTGGCTGG TGGACGAAAG CGACGATCAG GAAACCACCC TGGCCGAAAG CCAGGAAATG
GGCCAGCGCC GCGCCCTGCT GTCGGGAGCC TTGAAATCCC TCAATGAGCG CGAGCGCCAC
ATCCTGACCC AGCGCCGCCT GCGCGATGAT CCGGTGACCC TGGAAGATCT CTCCCAGCAT
TACGGCATCT CCCGCGAGCG CGTTCGCCAG ATCGAGGTGC GGGCCTTTGA AAAGCTGCAG
AAATGGATGC ACGGGGCGAT GACCGGGGCG GCGCCCGCCG TCGCCGCGGT CGCCTGTTAG
|
|---|
| Protein sequence | MATVAPGLSI GPESNLTRYL QNIRKFPMLA PEEEYTLAQR LRDSGDSEAA HRLVTSHLRL
VAKIAMGYRG YGLPMGEVIS EGNVGLMQAV KRFDPERGFR LATYAMWWIR AAIQEYILHS
WSLVKMGTTA AQKKLFFNLR KMKGQLQLMD EGDMHPDKVT QIATKLGVPE QDVINMNRRL
SSPDHSLNAP VRMDGDGEWQ DWLVDESDDQ ETTLAESQEM GQRRALLSGA LKSLNERERH
ILTQRRLRDD PVTLEDLSQH YGISRERVRQ IEVRAFEKLQ KWMHGAMTGA APAVAAVAC
|
|---|
| |