Gene Rru_A1094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1094 
SymboltolB 
ID3833401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1282972 
End bp1284303 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content62% 
IMG OID637825183 
Producttranslocation protein TolB 
Protein accessionYP_426182 
Protein GI83592430 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0823] Periplasmic component of the Tol biopolymer transport system 
TIGRFAM ID[TIGR02800] tol-pal system beta propeller repeat protein TolB 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCGAT TGGCGAAAGG CAAATGGCGC TCGACTCTGG GCGCCATGAT GGCATTGGCG 
GTTATGGTCG CGGCCATTCC ACAGGCCAGG GCCGAACTGG TGATCGACAT CACGCGCGGC
GTGCGCGAAC CGATGCCCAT CGCCATTCCG GTTTTCGGTG GGACGGACGC CCAGTCCAGC
GCCATGGGGC GCGATGTGGT GGGCGTGGTG TCCAATGATC TGCAGGGATC GGGATTGTTC
CGGGTGCTCG ATCCGGCCGC CTATATCCAA TCCCTGCCCA ATCTGGCGGT GCAGCCCCAG
TTCGCCGACT GGCGGGCGAT CAACGCCCAG GCCCTGGTTC AGGGCGAGGT TCAGCCCCAG
GGCGATGGCC GTCTGCGCGT GGCCTTCCGC TTGTGGGACG TGTTCAGCGG CCAGCAGGTC
GTCGGCCGCG CCTTCTTGAC CCAGGGCGAT AACTGGCGCC GGGTGTCCCA TATCATCGCC
GACGAGATCT ACAAGGCGAT CACCGGGGAA GAGGGCTATT TCGATACCCG CGTCGTCTAT
GTCGCCGAGA CCGGCCCCAA GACCAACCGG GTCAAGAAGC TGGCGATCAT GGATCAGGAC
GGCGCCAATC AGCGCAATCT GACCAATGGC GAGTCCATGG TGCTGACCCC GCGCTTCAGC
CCGACCGCCC AGGAAATCAC CTACCTCAGC TATTACAACA GCGTCCCCCG GGTCTATCTG
TTCAACATCG AGACCGGCCG CCGCGAATTG CTGGGCGATT TCCCCGGCAT GACCTTCGCC
CCGCGCTTCT CGCCCGATGG CAATAAGGTC ATCATGTCGA TGGCCCTCGA CGGCAATACC
GAAATCTACG AGATGGATCT GCGCACCCGG CGCTCGAGCC GGCTGACCAA CCATCCGTCG
ATCGATACCT CGCCGTCCTA TGCGCCCGAT GGCCGGCAGA TCACTTTCAA CTCCGATCGC
GGCGGCGCCC AGCAGATCTA TGTGATGAAT GCCGACGGAT CGGGGGTGCA AAGGATCAGT
TTCGGCGATG GCCGCTATGC AACGCCGGTA TGGTCGCCAC GCGGTGACCT CATTGCCTTT
ACCAAGCTGA AGGGCGGAAG GTTCTTTATT GGGGCCATGC GGCCCGATGG AAGCGGCGAA
AAGATCCTGA CCGAGGGATT TCTGGTTGAA GGTCCGACCT GGGCACCCAA CGGCAGGGTG
TTGATGTTCT TTCGTCAAGA CCCCAATGGC AGAACGACGC TACACAGCAT CGACGTAACC
GGTTATAATG AGCGCCAGAT TTCCACGCCG ACGGAGGCCT CTGACCCAGC ATGGTCGCCC
CTTCTGCCAT GA
 
Protein sequence
MTRLAKGKWR STLGAMMALA VMVAAIPQAR AELVIDITRG VREPMPIAIP VFGGTDAQSS 
AMGRDVVGVV SNDLQGSGLF RVLDPAAYIQ SLPNLAVQPQ FADWRAINAQ ALVQGEVQPQ
GDGRLRVAFR LWDVFSGQQV VGRAFLTQGD NWRRVSHIIA DEIYKAITGE EGYFDTRVVY
VAETGPKTNR VKKLAIMDQD GANQRNLTNG ESMVLTPRFS PTAQEITYLS YYNSVPRVYL
FNIETGRREL LGDFPGMTFA PRFSPDGNKV IMSMALDGNT EIYEMDLRTR RSSRLTNHPS
IDTSPSYAPD GRQITFNSDR GGAQQIYVMN ADGSGVQRIS FGDGRYATPV WSPRGDLIAF
TKLKGGRFFI GAMRPDGSGE KILTEGFLVE GPTWAPNGRV LMFFRQDPNG RTTLHSIDVT
GYNERQISTP TEASDPAWSP LLP