| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1019 |
|---|
| Symbol | |
|---|
| ID | 3833480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 1207986 |
|---|
| End bp | 1209260 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637825108 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_426107 |
|---|
| Protein GI | 83592355 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCAC GTCCCGCCAA CTGGTATTCA GATACCGCAA TTTCCGCGCC CGAAAGGCCC
CCTCTCGCCG GTGAGGCGCG GGCCGATGTC TGCGTCGTCG GCGCCGGCAT GACCGGCAGC
GCCGCCGCCT TGTTCCTGGC CGAGCGCGGC CTGTCGGTGC GGGTGATCGA GGCCGAGAGC
GTCGGCTTCG GCGCCTCGGG GCGCAGCGGC GGCCAGCTCA TCGCCGGGTA TGCCGCCGAG
ATGGCGACGG TTGAACGCCT GCTGCCCGAG GCACGGAGCC GCCTGTATTG GGATCTGGGG
GTGGAGGCCG TCGACCTGAC CCGCGCCCTT GTCGCCCGCC ACGCCATCGC CTGCGATTTC
ACCGACGGCC ATATCCATGC CGGTTTCAAG CCGCGCCATA TCGGCGCGCT TGAAGAGATG
ATCCGCGGCT GGGAGGGGTA TGGCTACCCG GGGCTGGAAT GGCTTGACGG CGCGGCCATC
GGGCGGGCCG TCGCCGCCCC GGGCTATCTG GCCGGCGTGC GCGACCGCCG CGGCGGCCAT
CTGCACCCGC TCAATTATAC CCTGGGATTG GCCAAGGCCG CCGAAGCCGC CGGCGCGGTC
TTCCACGAAT CGAGTCCCTA TCTTGGCCAT GAGGAAACCG CTCAAGGGGT GGTGGTGCGC
ACGCCCGCCG GTTTGGTTCG GGCGCGCTGG CTGATCCTGG CCGGCAACGC CTATTTCAAG
GACCGCCCGC GCGGTCTCGC CGCGACCGTC ATGCCCGTCG GCACCTATAT CATCGCCACC
GAGCCTTTGG GTGAGGCGCG GGCGCGGGCG CTGATCCCCG GGGGCGAGGC GGTGGCCGAT
ATCGCCTTCG TGCTCAATTA CTACCGGCTG ACCCGCGATC ACCGCCTGCT GTTTGGCGGT
GGCGTCAGTT ATTCGCGCAT CGATCCGCTC AGCATCCGCC GCACGCTGGG CGCCACCATG
GTCCGCACCT TCCCCCAATT GGCCGGGGTC GGGCTGTCCC ATGCCTGGGG CGGCCATGTG
GCGATCACCG TCAACCGGCT GCCCCATTTC GGGCGGATCG GCAAACGCTG CCTGTTCGCC
CACGGCTTTT CCGGCCATGG CGTCGGTCTG ACCGGGCTGG CGGGCAAGCT GATGGCCGAG
GTGGTGGCGG GAAGCGAGGA ACGCTTCGAC CTGATGGCGC GCATTCCCCA TCTGTCGTTT
CCCGGTGGCC GCTCCTTGCG CCTGCCGCTG CTGGTGCTGG GCTCCACCTG GCTGCGCCTG
CGCGATCTGC TGTAG
|
|---|
| Protein sequence | MTSRPANWYS DTAISAPERP PLAGEARADV CVVGAGMTGS AAALFLAERG LSVRVIEAES
VGFGASGRSG GQLIAGYAAE MATVERLLPE ARSRLYWDLG VEAVDLTRAL VARHAIACDF
TDGHIHAGFK PRHIGALEEM IRGWEGYGYP GLEWLDGAAI GRAVAAPGYL AGVRDRRGGH
LHPLNYTLGL AKAAEAAGAV FHESSPYLGH EETAQGVVVR TPAGLVRARW LILAGNAYFK
DRPRGLAATV MPVGTYIIAT EPLGEARARA LIPGGEAVAD IAFVLNYYRL TRDHRLLFGG
GVSYSRIDPL SIRRTLGATM VRTFPQLAGV GLSHAWGGHV AITVNRLPHF GRIGKRCLFA
HGFSGHGVGL TGLAGKLMAE VVAGSEERFD LMARIPHLSF PGGRSLRLPL LVLGSTWLRL
RDLL
|
|---|
| |