Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1018 |
Symbol | |
ID | 3833479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 1206643 |
End bp | 1207752 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637825107 |
Product | extracellular solute-binding protein |
Protein accession | YP_426106 |
Protein GI | 83592354 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGTCAC CTGTTCTGCG CGCCTTGAGT GGTGTTGCCG TTGCCCTGCT GATCGCCGGC CCGGCCGCAG CCGCCGAGGA CAAGGTTCTC AACGTCTATA ACTGGTCCGA TTACATCGCC GAGGACACCT TGGCGAAGTT CCAGGCCGAG ACCGGCATCA AGGTCAATTA CGACGTTTAC GACAGCAACG AGTTGCTGGA ATCGAAGCTT CTGGCCGGCT CTTCGGGCTA CGACATCGTC GTTCCCACCG ACCACACCCT GTCGCGGCTG ATCCAGGCCG GCATTGTTCA GAAGCTCGAC AAGGCGAAGA TCCCCAATCT CGCCAATCTC GACCCCAAGC TGACCGCCCG CGCCGCCGCC TATGACGCCG ACAACGCCCA TTCCGTTATT TACGAATGGG GCACCAATGG CCTCGGCATC AATATCGACA AGGTGCGCGC CGCCCTCGGC CCCGACGTGA AGCTTGATTC CTTCGATCTT CTGTTCAAGC CGGAATACGC CGAGAAGCTG GCGTCTTGCG GGATCCACGT TCTCGACAGC GCCGCCGAGG TCTTCTCGGT CGCCCGCAAT TACCTGGGAC TGGAGCCCAA TTCCACCGAT CCCAAGGATC TGGAAAAGGC CACGGCGCTG TGGATGGGCG TGCGCCCCTA TATCCAGAAG TTCCACTCCT CGGAATTCAT CAACGCCCTG GCCAATGGCG ACATCTGCGT GGCCTTCGGC TATTCGGGCG ATATCTTCCA GGCCCAGGCC CAGGCCCGGG CCAAGGAAGC CGCCAATGGC GTGAAGATCG ATTACATCAT TCCCAAAGAG GGCACGCTGA TCTGGTTTGA TCTGATGGCC GTTCCCGCCG ATGCCCCCCA CCCGGAAAAC GCCCATAAGT TCATCGACTT CATTCTTCAG CCGCAGATCT CGGCCGATAT CTCGAACTAC GTCTGGTACG CCAATGCCAA CAGCAAGGCG ACCGAGCTGC TCGACGAGGC GGTGCGGACC AATCCGTCGA TCTATCCGAC CCAGGAGGTG ATGGACCGCC TGTTCATCCA GAAGACGGCG TCGCCCGAAA TGGAGCGCCT GCGCACCCGC GCCTGGAACA AGATCAAAAC CGGCATCTAA
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Protein sequence | MPSPVLRALS GVAVALLIAG PAAAAEDKVL NVYNWSDYIA EDTLAKFQAE TGIKVNYDVY DSNELLESKL LAGSSGYDIV VPTDHTLSRL IQAGIVQKLD KAKIPNLANL DPKLTARAAA YDADNAHSVI YEWGTNGLGI NIDKVRAALG PDVKLDSFDL LFKPEYAEKL ASCGIHVLDS AAEVFSVARN YLGLEPNSTD PKDLEKATAL WMGVRPYIQK FHSSEFINAL ANGDICVAFG YSGDIFQAQA QARAKEAANG VKIDYIIPKE GTLIWFDLMA VPADAPHPEN AHKFIDFILQ PQISADISNY VWYANANSKA TELLDEAVRT NPSIYPTQEV MDRLFIQKTA SPEMERLRTR AWNKIKTGI
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