| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0990 |
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| Symbol | |
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| ID | 3833549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 1176529 |
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| End bp | 1179009 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637825079 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_426078 |
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| Protein GI | 83592326 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCCAT CCATCCAAGA CCTGCGGTCC TCCGCCAGCG CGACCGATCC CAAACGCCCC
CGACGCCTGC GCCTGGGCAT TGGCACCCAT CTCTGGATCG CCTTTCTCTC CATCGGCGCG
CTGTCCACCG TGGTGACGCT GATCGCCTTT AATTCCTATA ATCAGGCGAC CGCCACCTTC
AAAGCGATCA CCCATGACCG TCTGCCGGCG ATCGTGGCGG TGGCGAAGCT CGCCGACGAC
AGCAACGCCC TGCTGACCAC CTTGCCCCAT GTCGTTCTCG TCGACAGCGC CGGCACCTTA
AGCGAGCATT GGCGCGATGT GGCCGAGGCC GAAGAGCGCC TGAACCGTTC GATCGCCGCC
GTCGAGGCCC TGCCCGCCCC CAACACCCGC CTTACGGATT TCAGCGATTT GTCGGGGCGC
ATTTCGGCGC AGCTGCAAAT CCTGCTGTCC GCCCTTCAGG AAGCCCGCGG CGCCCAGCGC
GACATCCTTG ATCTGGCGAC CCAGATGGAT CTCCTCCATC AGAAGGTTCG CCTGCTGATG
GCCGATGCCG GAACCCAGGG CCGCATCCCC CCGGACTCGC TGTATCTGGC CACGCGCCTT
TTGTCCTTGC TGGGCGAGGT TCTGGCCAGC GACGACGCCA ACGATATCGC CGTCAATGCC
GGTCGGATCG ATCAATCGCT CCAGCGCCTG CAAGCCAGCA TCTCGGCCAA GCCCAACGAC
GCCATCGCCG AGATGAACAA TACCCTGATC GCCATCGGCT CCGGCCCGAA TGGACTGGTC
GCGCGCAAGC GTCTCGCCCT GCGCGCCGGC GCCGTCGCCA AGGACCGCCT GCGCGACGTG
CGGGCCCTGT CGCGCCAGAT CGGCGAGCGG GTTCAGGGCA TGTTGGGCGA CACCATGATC
GCCGTCGACG CCGATCGACA GGCGACGGAG AAACAGCTTC ACCTGTCGAA GATCCTGCTG
GCGGCGACAA GCGCCACGGG GCTTCTTGGC GCCATCCTCA TCGCCTGGCT CTACGTCGGG
CGGGCGATCG TCGCCCGCCT CGACCGGCTT TCCTATGGCA TGCGGGAAAT CGCCGATGGT
CACCTCAAGG GATCGCTCCC CATCGGCGGG AAAGACGAAA TCGGCGAGAT GGCCCGCGCC
GTATCGGTCT TTCGCGACGC CATGGAGCGC ATTGATTATC TGGCCAGCAA CGACAGCCTG
ACCGGCCTGC TCAACCGCCA CGGCTTTCTC GCCGGGGGGG AACGCCTGCT GGCGCGCGGG
CAGCGTCGGG GTTGGCTGAT CAGCATCAAC CTGCGGCGCT TCAAGGACGT CAATCAGATG
TTCGGGCATC AGACCGGCGA CACCATCCTG GGCGAGGTCG CCGATCGCCT GCGCCGACTC
GCCGGGCCCG AGGATCTGGT GGCCCGGCTC GGCGGCGATG ATTTCGCCCT GCTCGCCCTC
GACCCCGATG ACGAAGGCCG GGCCCTGGCG TTATGCCGAA ACATTCTCGC CGCCTTGCGG
CCGGCGATCG TCATCGGTCA CGCCTCGCTC GATATCGAAG CCTGCATCGG CTTTGCCGGT
TGGCCCGAGG ACGCCGAGGA TCAGGGAAGC CTGCTGCGCC GCGCCGAACT GGCGATGCAA
CAGGCCAAGA ACGATCCCGG CGACCCGATC TGCCGCTATC GCTCGGCGTT GAGCGAGGAT
CTCGAGGTCC GCTCGCAGGT TCGCAAGGAT CTGCGCGCGG GCATCATCGC CGGAGAGTTG
CGCCTGCTCT ACCAGCCCAA GGTCGATCTG CGCAGCGGCC GGGTGGTGGG CATGGAGGCT
CTGGTCCGTT GGAACCATCC CCGGCACGGC CTCATCCCCC CGGCCCGCTT CATCCCGGTG
GCCGAAACCT CGGGCCTCAT CATCCCCCTT GGCGAATGGG TCCTGGAGGA ATGCTGCCGG
CAATTGCGCC TCTGGCGCGA TGACGGCATG AGCGATCTGA AGGGGTCGGT CAACATGTCG
CCGGTCCAGG TCTTCAGCCA GGATGTGGCC GCCCTGGTCG CCGAGGCCCT GCACACCACC
GGCCTGCCGG CCGAGGCCTT GGAAATCGAG ATCACCGAAG GCGTCTTCGT CCATGACGAG
CAGCGCGCCC GCCGGCGGCT GGAAGGCTTG CGCGCCCTGG GCGTCGGACT GGCCATCGAT
GATTTCGGCA CCGGCTACTC GGCGCTCGCC TATCTCAAAC GCCTGCCCGC CACCTCGCTG
AAGATCGACC AAAGCTTCAT CCGCGAAGTG ACCGACCAAC CCGAACAGGC CCGGCTGTGT
CGGGCGATCA TCGGCGTCGG CCATGATTTC GGGCTGACGG TGGTGGCCGA GGGCATCGAG
ACCGCCGAGC ATTTGGCCTT TTTGCGCGCC GAAGGCTGTG ATTTCGGCCA GGGTTACTAT
TTCGCCAAGC CGCTCGAGGC CCAAGATTTC GCCAAGGTGC TGCGTGACCA GCCCTGGCTG
ACCGGGGATG CCGCCCAATG A
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| Protein sequence | MEPSIQDLRS SASATDPKRP RRLRLGIGTH LWIAFLSIGA LSTVVTLIAF NSYNQATATF
KAITHDRLPA IVAVAKLADD SNALLTTLPH VVLVDSAGTL SEHWRDVAEA EERLNRSIAA
VEALPAPNTR LTDFSDLSGR ISAQLQILLS ALQEARGAQR DILDLATQMD LLHQKVRLLM
ADAGTQGRIP PDSLYLATRL LSLLGEVLAS DDANDIAVNA GRIDQSLQRL QASISAKPND
AIAEMNNTLI AIGSGPNGLV ARKRLALRAG AVAKDRLRDV RALSRQIGER VQGMLGDTMI
AVDADRQATE KQLHLSKILL AATSATGLLG AILIAWLYVG RAIVARLDRL SYGMREIADG
HLKGSLPIGG KDEIGEMARA VSVFRDAMER IDYLASNDSL TGLLNRHGFL AGGERLLARG
QRRGWLISIN LRRFKDVNQM FGHQTGDTIL GEVADRLRRL AGPEDLVARL GGDDFALLAL
DPDDEGRALA LCRNILAALR PAIVIGHASL DIEACIGFAG WPEDAEDQGS LLRRAELAMQ
QAKNDPGDPI CRYRSALSED LEVRSQVRKD LRAGIIAGEL RLLYQPKVDL RSGRVVGMEA
LVRWNHPRHG LIPPARFIPV AETSGLIIPL GEWVLEECCR QLRLWRDDGM SDLKGSVNMS
PVQVFSQDVA ALVAEALHTT GLPAEALEIE ITEGVFVHDE QRARRRLEGL RALGVGLAID
DFGTGYSALA YLKRLPATSL KIDQSFIREV TDQPEQARLC RAIIGVGHDF GLTVVAEGIE
TAEHLAFLRA EGCDFGQGYY FAKPLEAQDF AKVLRDQPWL TGDAAQ
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