Gene Rru_A0952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0952 
SymbolmurD 
ID3833625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1135925 
End bp1137358 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content70% 
IMG OID637825040 
ProductUDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 
Protein accessionYP_426040 
Protein GI83592288 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase 
TIGRFAM ID[TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.939655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGAAGC TAATCCCCCT TTACCAGTAC GCCGGACAGG ACCTGGGCAT CATGGGCCTG 
GGCAAATCGG GAATGGCCAC GGCGCGGGCG CTGGCGGGCA CGGGAACGCG CGTCCACGCC
TGGGACGACA GCCCGATCCT GCGTGACGCC GCCCGCGCCG AGTCCGTTCC GCTGTGCGAC
CTCACCGACC AGACCAGCCG CACGTCCCCC TGGCCGGCGC TGCAGGGCGT GGTGTGGAGC
CCGGGCATTC CCCACACCTT CCCCCAGCCC CATCCGGTGG CGGTGATCGC CCACGAGCGC
GGCGTGCCGC TGTTTTGCGA CATCGACCTG CTGGCCCGCG CCCGCCAGGA CTGCTTCTTC
CTGGGCATCA CCGGCACCAA CGGCAAATCG ACGACCACGG CGCTGATCGG CCATATCCTG
AAGGCGGCCC GCCACCCGGT GCAGGTCGGC GGCAATCTCG GCACCCCGGC GCTGTCGTTC
GAGCCCCTGC CCTTCCATGG CACCTATGTG CTGGAGCTGT CGTCCTATCA GCTCGAACTG
GTGCCCTCGC TGTGCTGCGA CGTGGCGGTG CTGCTCAACA TCACCCCCGA TCATCTGGCC
CGCCATGGCG GCATGGACGG CTATATCGCC GCCAAGCGTC AGATCTTCCG CTGCGGTCCG
CGCCCGGGCG TCGCCGTCGT CTGCATCGAC GACGAGCCGT CGCTGGCCAT CCATGACGCG
CTGTGCCGCG AGAACGGTCG CAAGGTGGTG GCGGTCTCCA CCCGCGCCCT GCCGCGCGGC
GGCGTTGGCG CCGTCGACGG CCAGTTGGTC GACGCCACCC AGGGCCGGCC GCGCGCCGTC
GCCGATCTGA CGACGATCGC CACCCTGCCC GGCGCCCACA ACTGGCAAAA CGCCGCCGCC
GCCTATGCCG CCTGCCGCCA GCATGGGATC GACGCCAAGA TCATCGTCGA GGCGATGGCC
AGCTTCCCCG GCCTGCCCCA CCGCCAGGAA CTGGTGGCCG AGATCGACGG CGTGCGCTTC
ATCAACGACA GCAAGGCGAC CAATGCCGAC GCCGCCGACA AGGCGCTGCG CTGCTATGAC
ACGGTTTATT GGATCGCCGG CGGCCAGCCC AAGGAAGGCG GCATCGTCAG CCTCGAGCCG
CATTTCCACC GCATGCGCCA GGCCTATCTG ATCGGTCAGG CCGCCCCGGC CTTTGAGCGC
ACCCTGAAGG GCAAGGTTCC CCTGTCCCAG GTCGGCACCC TGACCCGCGC CGTCACCGAA
GCCGCCAAGG CCGCCTGGCG CGACGCCATC CCCGGCGCCG TCGTTTTGCT GTCGCCGGCC
TGCGCCTCGT GGGATCAGTT CTCCAGCTTC GAGCATCGCG GCGACATCTT CCGCGAACTC
GTCGCCGATC TCGCCCATAC CCGGGCCGCC GCCAAGCCGG GGGGCCGCCG ATGA
 
Protein sequence
MAKLIPLYQY AGQDLGIMGL GKSGMATARA LAGTGTRVHA WDDSPILRDA ARAESVPLCD 
LTDQTSRTSP WPALQGVVWS PGIPHTFPQP HPVAVIAHER GVPLFCDIDL LARARQDCFF
LGITGTNGKS TTTALIGHIL KAARHPVQVG GNLGTPALSF EPLPFHGTYV LELSSYQLEL
VPSLCCDVAV LLNITPDHLA RHGGMDGYIA AKRQIFRCGP RPGVAVVCID DEPSLAIHDA
LCRENGRKVV AVSTRALPRG GVGAVDGQLV DATQGRPRAV ADLTTIATLP GAHNWQNAAA
AYAACRQHGI DAKIIVEAMA SFPGLPHRQE LVAEIDGVRF INDSKATNAD AADKALRCYD
TVYWIAGGQP KEGGIVSLEP HFHRMRQAYL IGQAAPAFER TLKGKVPLSQ VGTLTRAVTE
AAKAAWRDAI PGAVVLLSPA CASWDQFSSF EHRGDIFREL VADLAHTRAA AKPGGRR