Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0952 |
Symbol | murD |
ID | 3833625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 1135925 |
End bp | 1137358 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637825040 |
Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
Protein accession | YP_426040 |
Protein GI | 83592288 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.939655 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGAAGC TAATCCCCCT TTACCAGTAC GCCGGACAGG ACCTGGGCAT CATGGGCCTG GGCAAATCGG GAATGGCCAC GGCGCGGGCG CTGGCGGGCA CGGGAACGCG CGTCCACGCC TGGGACGACA GCCCGATCCT GCGTGACGCC GCCCGCGCCG AGTCCGTTCC GCTGTGCGAC CTCACCGACC AGACCAGCCG CACGTCCCCC TGGCCGGCGC TGCAGGGCGT GGTGTGGAGC CCGGGCATTC CCCACACCTT CCCCCAGCCC CATCCGGTGG CGGTGATCGC CCACGAGCGC GGCGTGCCGC TGTTTTGCGA CATCGACCTG CTGGCCCGCG CCCGCCAGGA CTGCTTCTTC CTGGGCATCA CCGGCACCAA CGGCAAATCG ACGACCACGG CGCTGATCGG CCATATCCTG AAGGCGGCCC GCCACCCGGT GCAGGTCGGC GGCAATCTCG GCACCCCGGC GCTGTCGTTC GAGCCCCTGC CCTTCCATGG CACCTATGTG CTGGAGCTGT CGTCCTATCA GCTCGAACTG GTGCCCTCGC TGTGCTGCGA CGTGGCGGTG CTGCTCAACA TCACCCCCGA TCATCTGGCC CGCCATGGCG GCATGGACGG CTATATCGCC GCCAAGCGTC AGATCTTCCG CTGCGGTCCG CGCCCGGGCG TCGCCGTCGT CTGCATCGAC GACGAGCCGT CGCTGGCCAT CCATGACGCG CTGTGCCGCG AGAACGGTCG CAAGGTGGTG GCGGTCTCCA CCCGCGCCCT GCCGCGCGGC GGCGTTGGCG CCGTCGACGG CCAGTTGGTC GACGCCACCC AGGGCCGGCC GCGCGCCGTC GCCGATCTGA CGACGATCGC CACCCTGCCC GGCGCCCACA ACTGGCAAAA CGCCGCCGCC GCCTATGCCG CCTGCCGCCA GCATGGGATC GACGCCAAGA TCATCGTCGA GGCGATGGCC AGCTTCCCCG GCCTGCCCCA CCGCCAGGAA CTGGTGGCCG AGATCGACGG CGTGCGCTTC ATCAACGACA GCAAGGCGAC CAATGCCGAC GCCGCCGACA AGGCGCTGCG CTGCTATGAC ACGGTTTATT GGATCGCCGG CGGCCAGCCC AAGGAAGGCG GCATCGTCAG CCTCGAGCCG CATTTCCACC GCATGCGCCA GGCCTATCTG ATCGGTCAGG CCGCCCCGGC CTTTGAGCGC ACCCTGAAGG GCAAGGTTCC CCTGTCCCAG GTCGGCACCC TGACCCGCGC CGTCACCGAA GCCGCCAAGG CCGCCTGGCG CGACGCCATC CCCGGCGCCG TCGTTTTGCT GTCGCCGGCC TGCGCCTCGT GGGATCAGTT CTCCAGCTTC GAGCATCGCG GCGACATCTT CCGCGAACTC GTCGCCGATC TCGCCCATAC CCGGGCCGCC GCCAAGCCGG GGGGCCGCCG ATGA
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Protein sequence | MAKLIPLYQY AGQDLGIMGL GKSGMATARA LAGTGTRVHA WDDSPILRDA ARAESVPLCD LTDQTSRTSP WPALQGVVWS PGIPHTFPQP HPVAVIAHER GVPLFCDIDL LARARQDCFF LGITGTNGKS TTTALIGHIL KAARHPVQVG GNLGTPALSF EPLPFHGTYV LELSSYQLEL VPSLCCDVAV LLNITPDHLA RHGGMDGYIA AKRQIFRCGP RPGVAVVCID DEPSLAIHDA LCRENGRKVV AVSTRALPRG GVGAVDGQLV DATQGRPRAV ADLTTIATLP GAHNWQNAAA AYAACRQHGI DAKIIVEAMA SFPGLPHRQE LVAEIDGVRF INDSKATNAD AADKALRCYD TVYWIAGGQP KEGGIVSLEP HFHRMRQAYL IGQAAPAFER TLKGKVPLSQ VGTLTRAVTE AAKAAWRDAI PGAVVLLSPA CASWDQFSSF EHRGDIFREL VADLAHTRAA AKPGGRR
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