Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0888 |
Symbol | |
ID | 3834608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 1065421 |
End bp | 1066032 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637824976 |
Product | TetR family transcriptional regulator |
Protein accession | YP_425976 |
Protein GI | 83592224 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGCGAC CCGCATCGGA TACCAGGCAG AAACTGATCG ATACCGCGCT CGAGCTGATG TGGACCAACA GCTATGGGAC GGTCAGTGTC GATGACATCT GCAAGGCCGC CGATGTGAAG AAGGGCAGCT TCTATCACTT CTTTCCCTCC AAGGTGGATT TGTCGATCGC CGCCATGGAG CAATCCCACC ACGAGTTGGA AGAGACCTAC GACAAGATCT TTTCCCCCGC CGTGCCGCCG ATCGAACGCT TCATGCGCAT GGCCGATTGC GTGATCGCCC TGCAGGCCGA GGTGGCCGAG AAATACGGCC ATGTCTGCGG CTGTCCCTGC GCCTCGCTGG GCTCCGAGAT GGCCGGCCAG GAAGATGGAA TCCGCGCCAA ATTCGAAGAC CTCGCCCACC GCAAGGAGCG TTATTACGAG AATGCCCTGC GCGATATGGT CGGCGATGGC CTGCTGGCGC CAACCACCGA TGTGAAGGTG TTGGCCCAGG AGATCTATAC CTATCTGGTG GGCCAAATGA TGATCGCCCG CATCCAGAAC GACCTCGCCC CGCTGAAGCG CGATCTCAAG CGCGGCTTAG CGCGGCTTCT GGGCGTGGTG GAGCCGGCCT GA
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Protein sequence | MGRPASDTRQ KLIDTALELM WTNSYGTVSV DDICKAADVK KGSFYHFFPS KVDLSIAAME QSHHELEETY DKIFSPAVPP IERFMRMADC VIALQAEVAE KYGHVCGCPC ASLGSEMAGQ EDGIRAKFED LAHRKERYYE NALRDMVGDG LLAPTTDVKV LAQEIYTYLV GQMMIARIQN DLAPLKRDLK RGLARLLGVV EPA
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