| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0858 |
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| Symbol | |
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| ID | 3834335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 1022400 |
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| End bp | 1023947 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637824946 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_425946 |
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| Protein GI | 83592194 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.916368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCCTC CGTCCTTTCC GCCCCTGACC GGCAACCGGC TGGTCCTCGC CACCATCGCC
TTGTCGCTGG CCACTTTCAT GAACGTGCTC GACACCACCA TCGCCAATGT GGCCCTGACC
ACCATTGCCG GCGATCTTGG CGTCAGCGTC AGCCAGGGAA CCTGGATCAT CACCTCGTTT
GGCGTCTCCA ACGCCATCGC CGTGCCGCTG ACCGGCTGGC TGGTCGGGCG GATCGGACAA
TTGCGGCTGT TCTTATCGGC GGTGGTGTTG TTCGTCGTGC TGTCGCTGTT GTGCGGGTTA
TCGACCAATC TGGAATCCCT GCTGGCGTTC CGTTGCCTTC AGGGGCTGGT CGCCGGACCG
ATGGTGCCGC TGTCCCAGGC GCTGTTGCTG CAATGCTATC CCAAGGCCAA GGCCGGGATG
GCGATTGCCC TGTGGTCGAT GACAACGACG GTGGCGCCGG TGATGGGGCC GGTTCTCGGC
GGCTGGCTGA CCGACAACGT GTCCTGGCCG TGGATCTTCT ACATCAATGG TCCAATCGGC
CTGATCGCGG CGTGGCTCAC CTTCGTCACC CTGAAAGGAC GCGAGAGCGC CACCCGCACC
CTGCCGATCG ACACCATCGG CTTGGCTCTT CTGGTGCTGT GGGTCGGCGC GACGCAGATC
ATGCTCGACA AGGGCAAGGA ACTCGACTGG TTCAATTCCT CGACCATCAT GGCGCTGGCG
ATCATCGCCG TCGTCACCTT CACGTTCTTC CTGATCTGGG AATTGACCCA AAAGCATCCG
ATCGTCGATC TGACCTTGTT CAAGGGCCGC AACTTCACCA CCGGAACCAT CGCCATCACC
CTGGGCTATG CGGTTTTCTT CGGAAATCTG GTGGTCATCC CGATGTGGTT GCAAAGCGTC
ATGGGGTATA CGGCCACCTG GGCCGGGCTG GTCACCGCGC CGATCGGATT TTTCTCGCTT
CTCTTGTCGC CTTTGATCGG CCGCACCATT CACAAGGTCG ATCCCCGACT GTTCGCCAGC
TTCGCCTTCT TCATTTTCGC CGTCTGCAGC TTCTGGCGCT CAACCTTCAG CCCCGATGTC
GCCCTGTGGG ACATCGCCGC CAGCCATTTG CTGCAAGGCT TCGCCATGGC GACGTTTTTC
ATCGCCCTGA CCACGGTGAT CCTGTCGGGG CTGGATCAGC AGCGCATTCC CGCCGCCTCG
GGCCTTTACA ACTTCATGCG GATCATGGCC GGCTCGTTCG CCGCCTCGGT GTGGACCACC
CTGTGGGAGA ATGGCGCGAC CCGGCACCAC GCCTATCTAA CCGAAAGCGT CACCGCCTAT
TCCGCGCCGA CCGCCCATTT TGAAGCCGGC CTGGGAGCCC TTGGACTGAC CACCGGCCAA
ATCTACGGCA TCATCAACGC GGAAATCGGC CGCCAGTCCC TGATTTTGTC GATCACCGAC
CTGTTCTGGC TGTCGGGTCT GTTGTTCCTG GTCCTGATCG GCCTGATCTG GCTGTCCCAT
CCGGTTCGCC GGGAAACACG CCCCGCCAAG GACGATCGAA ACCGCTAA
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| Protein sequence | MPPPSFPPLT GNRLVLATIA LSLATFMNVL DTTIANVALT TIAGDLGVSV SQGTWIITSF
GVSNAIAVPL TGWLVGRIGQ LRLFLSAVVL FVVLSLLCGL STNLESLLAF RCLQGLVAGP
MVPLSQALLL QCYPKAKAGM AIALWSMTTT VAPVMGPVLG GWLTDNVSWP WIFYINGPIG
LIAAWLTFVT LKGRESATRT LPIDTIGLAL LVLWVGATQI MLDKGKELDW FNSSTIMALA
IIAVVTFTFF LIWELTQKHP IVDLTLFKGR NFTTGTIAIT LGYAVFFGNL VVIPMWLQSV
MGYTATWAGL VTAPIGFFSL LLSPLIGRTI HKVDPRLFAS FAFFIFAVCS FWRSTFSPDV
ALWDIAASHL LQGFAMATFF IALTTVILSG LDQQRIPAAS GLYNFMRIMA GSFAASVWTT
LWENGATRHH AYLTESVTAY SAPTAHFEAG LGALGLTTGQ IYGIINAEIG RQSLILSITD
LFWLSGLLFL VLIGLIWLSH PVRRETRPAK DDRNR
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