Gene Rru_A0843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0843 
Symbol 
ID3834417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1002695 
End bp1004428 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content70% 
IMG OID637824931 
ProductABC transporter component 
Protein accessionYP_425931 
Protein GI83592179 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00459321 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCCGG TGCTGTGGGA GTTGCTCAAA CCCTATCGGT GGCGCATGGC GTTGGCCATG 
GGGTTGCGCG CCGTGGCGGG TCTGGCGTCC CTGCTGCCCT GGGTGTTGGT GTCCTGGTGG
GCCGACACCC TGGTGACGGG CGGCGCCGGG GCCGAGGGGG CGCCGATGGG GGCGATTCCG
GGACTGGTCG CGGCGACGAT GGTTGTTTGG CTGGTCAGTC AGGCCCTGGC GGTCCATCTG
GCGCATGGGG TGGACGCCGA TCTGTGCGGC GATCTGCGCC GGCGGTTGCT AACCCACCTG
GAGCGCGCCC CGCTGGACTG GTTTTCCCGG CAGGGCCAGG ACGGTGTCGC CCGTTTGGCT
GATCAGGACG TGCGGGCGTT GCATCAACTC GTCGCCCACG CGCCCACCGA TCTCAGCTCC
CTTGTGGTCG TTCCCTTCGC TGCGCTGCTC TGTCTGGCTT GGCTGCAGCC GGCCTTGCTG
GTTTTTTGTT TGGTGCCCTT GGCGGCGGCG GCGGCCGGGT TCGCCCTGTT GCGCTCGCCA
GCCTATCGGG ACGAGGGGAC CCGGCGCGAC GCCGCGCTCG AACGGCTGTC CGTGGATTAT
GGCGAATTCG CCCAAAATCT GCCCCTGGCC CGACAATACC CCGGAGCGGG AGTCCAGCGC
GGCGTCGAGC TGTCCGCCAA GGGATTCGAG AGCGCCTTTT CCGCCTGGGT GAAACGGGTC
GGACATGTGG CGGCCCTGAT CGAACTCGTG CTCGGAGGGC CCTGGCTGAT GGCCTGGGTT
CTGCTTGGGG CGATGGCGTT GGCGGTGCTT GGCATGCCGC TGGCCGTCGG GCCGCTCTGC
GCCTTTCTTC TCCTGACCCG GGCGATGGCG GCGCCGATAC AGGCGATGGG CCATGGCGCC
GATGCCCTGA TGGGCGCGCG GGCCGCGGCC GAGCGGTTGC AGGCCGTCTG CGACCTGCCG
CCCCTGTCCG AGGGGCGGGC AGGTCAGATC CCGCGCGACG GGTCGGTCGT CGTGCGCGGC
CTGCGCTTCT CCTATCCAGA CCGGGAGGTT CTCAAGGGCG TGGATCTGGA TTTGGCCGAG
GGGGGGCTCA ACGCCCTGGT GGGTCCGTCC GGTTCGGGAA AAAGCACGAT GCTGCATGTT
CTCGCCCGCC ATATGGACCC CCAGGCCGGA ACCATCCTCG TTGGTGGCGT GCCCTTGAGG
GACCTCCCCG ACGCGGTCCG TCACCGCCAT ATCGTCATGC TGACGCAACA GGCCGTGGCG
CTCGACCTCT CCTTGAGGGA GAACATCGCG CTCCTCTGTC CCGAGGCCAA GTTCGAAGAC
ATCCGCCAAG CCGCGCGGGA CGCCCGCTTG GACGACGCCA TCATGGCGCT GCCCCGGGGA
TACGACAGCC TGTCGGGTCG CGACGTCAAA CTGTCGGGCG GTGAAGTGCA ACGCCTCGCC
CTGGCCCGCG CCCTGCTGTC GTCGGCCCGT CTTTTCCTGC TGGACGAGCC CACCTCGGCG
ACCGACCCGC AAACGGCCCA GGCCCTTCAC CGAGCCGTGC GCGAGCGGCT GGCCGGGCGC
ACCCGTCTGA TCGTCTGCCA CCGCCTGTCG GAGGTGAGCG ACGCCGACCG AATTGTGGTG
TGCCACGAGG GGCGGTTCGT GGCCCAGGGC ACCCACGCCC ACCTGCTGTC GTCGGGGGGG
CTCTACGCGG ACCTCTGGCG GGACCAGCGC CGCGCCGAGG GAGAGGCGGC ATGA
 
Protein sequence
MTPVLWELLK PYRWRMALAM GLRAVAGLAS LLPWVLVSWW ADTLVTGGAG AEGAPMGAIP 
GLVAATMVVW LVSQALAVHL AHGVDADLCG DLRRRLLTHL ERAPLDWFSR QGQDGVARLA
DQDVRALHQL VAHAPTDLSS LVVVPFAALL CLAWLQPALL VFCLVPLAAA AAGFALLRSP
AYRDEGTRRD AALERLSVDY GEFAQNLPLA RQYPGAGVQR GVELSAKGFE SAFSAWVKRV
GHVAALIELV LGGPWLMAWV LLGAMALAVL GMPLAVGPLC AFLLLTRAMA APIQAMGHGA
DALMGARAAA ERLQAVCDLP PLSEGRAGQI PRDGSVVVRG LRFSYPDREV LKGVDLDLAE
GGLNALVGPS GSGKSTMLHV LARHMDPQAG TILVGGVPLR DLPDAVRHRH IVMLTQQAVA
LDLSLRENIA LLCPEAKFED IRQAARDARL DDAIMALPRG YDSLSGRDVK LSGGEVQRLA
LARALLSSAR LFLLDEPTSA TDPQTAQALH RAVRERLAGR TRLIVCHRLS EVSDADRIVV
CHEGRFVAQG THAHLLSSGG LYADLWRDQR RAEGEAA