| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0833 |
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| Symbol | |
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| ID | 3834407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 987840 |
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| End bp | 988874 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637824921 |
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| Product | CRISPR-associated Cas1 family protein |
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| Protein accession | YP_425921 |
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| Protein GI | 83592169 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03640] CRISPR-associated endonuclease Cas1, DVULG subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0219387 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC TGTTGAACAC CGTTTACGTC ACCACCGAGG GAACGGGGTT GCGCAAGGAC
GGTGAAAATC TGGTCGCCGA GCTTGACGGC GTGCAAAAGG GCCGGGTTCC CTTGCATATG
GTGGGCTCTG TGGTGGTTTT TGGCGGCACC TATGTTTCGC CCGGGCTAAT GGGGGCTTGC
GCCGCCCATG GCATCACCAT CGTGCTGTTG GACCGGGTTG GTCGTTTTCA GGCGCGGGTC
GAGGGGCCGG TCGCCGGCAA TGTGCTGCTG CGCCGCGCCC AATACAAAGC CTCCGAGGCG
CCCGAGGATA TCGTCAAAAG CCTGATCTTG GGCAAAGTCT CCAATCAGCG GGCGGTTCTG
CTGCGGGCGC TGCGCGATCA CGGTGCCGAT TTTCCGGCGG CCGAAGCCTT GGCGGTGAAA
GACGCCATCG ATCGCATGGC CCATATCCTG CGCAAGGTCG GCGCCTCGGC CGAGGATGCC
GACCACCTGC GCGGCGCCGA AGGCGAGGCG GCCAGCCTTT ATTTCGGGGT TTTTGGCCAG
TTGATCCGCT CTCCCGATGG CGATTTCGCC TTTCGTGGTC GCTCGCGCCG TCCGCCGCTC
GATCCGACGA ATGCCCTGCT GTCGTTTCTA TATACCCTGT TGACCCACGA TTGCCGCAGT
GCTTGCGAAA GTGTCGGACT TGATCCCGCC GTGGGATTTC TGCACCGCGA TCGCCCGGGC
CGCCCGAGCC TCGCCCTTGA TCTGATGGAA GAATTGCGGC CGGTTCTGGT TGATCGCTTG
GCGTTGTCCT TGATCAATCG CCGTCAGCTT CGGGCGACGG ATTTCCAGCG CCTGGACGGC
GGCGCCGTTC TTTTGACCGA CGAGGCGCGC AAGACGGTGC TAAGCGCTTG GCAGGAGCGC
AAGAAACAGG AACGGCGCCA TCCCTTTCTT GAGGAAAGCG CCCCGCTTGG CCTTGTGCCC
TATCTTCAGG CCCAGATGCT TGCCCGCCAC CTGCGCGGGG ATCTTGACGC CTATCCGCCG
TGGTTCTGGA AGTAG
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| Protein sequence | MKKLLNTVYV TTEGTGLRKD GENLVAELDG VQKGRVPLHM VGSVVVFGGT YVSPGLMGAC
AAHGITIVLL DRVGRFQARV EGPVAGNVLL RRAQYKASEA PEDIVKSLIL GKVSNQRAVL
LRALRDHGAD FPAAEALAVK DAIDRMAHIL RKVGASAEDA DHLRGAEGEA ASLYFGVFGQ
LIRSPDGDFA FRGRSRRPPL DPTNALLSFL YTLLTHDCRS ACESVGLDPA VGFLHRDRPG
RPSLALDLME ELRPVLVDRL ALSLINRRQL RATDFQRLDG GAVLLTDEAR KTVLSAWQER
KKQERRHPFL EESAPLGLVP YLQAQMLARH LRGDLDAYPP WFWK
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