| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0690 |
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| Symbol | |
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| ID | 3833927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 815613 |
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| End bp | 819173 |
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| Gene Length | 3561 bp |
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| Protein Length | 1186 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637824775 |
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| Product | PAS/PAC sensor Signal transduction histidine kinase |
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| Protein accession | YP_425781 |
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| Protein GI | 83592029 |
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| COG category | [S] Function unknown
[T] Signal transduction mechanisms |
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| COG ID | [COG3287] Uncharacterized conserved protein
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCGCG CGACGCAAGA CAAAACCCTG ATGGCTTCCC CGGCGCCGGC CGGCCTTCCC
GACGGTCGGA TGGTGCGCGT GCGCGAGGCC GGTCCCGATC TGGCCGGGGT GGACGAGGCG
AGCTTCGGCT TTTCCGGCCG GCCGGCGGCC CTCGCCCTGG CCTTCGTGTC CCCCCATCTT
GATTTCGCCG AGGTTCTGGA GGGGCTGCGC CGCCTTGCCG GACCGACGCC GCTGATCGGG
GTTTCGTCCT TTGGCGGCCT TTGCGCCTCG TGCCCCGGGG GCGGGCTCTA TCGCTCGGCC
GGGCCGGAGG CTCCGGGCAT CATTCTTCAG GTGTTCTCGG CCGAGGTGAT CGGTACGGTC
AGCATTCAGT CGGTTTTTCT GCACAATGCC GACATCCGCG GCGAGCAACC CAGCCTTGAA
CGCGACACGC GGGTGGCCAG GATCGGCGCC GATCTGGCAG AGATCGCCTT GCCCTTCGCC
CTTGATGCCC GCGACAGTCT GGCGCTGACC TTTGTCGATG GCCTGTCGGC CTGCGAAAAC
TACCTGATGG AAGCCATCTA CGAGAGCGCG CGCTTTCCCT GTCTGTTCGT CGGCGGCTCG
GCGGCCGGCA CCCTTGAGTT CCGTCACACC TATTTGTTCG ACGGCCAGCG GGTTCTGGAA
GACCACGCGG TGCTGGTTTT CATCAAGCTG GCCCCGGGCA AGCGCTACGG CATCTTGAAA
AGTCAGAACT TCGTCAAATC CGGCGTGGCC TTTTCGGTGG TCGAGGCCGA TGCCGATCGG
CGGACCGTCA CCTCGGTCCT TGATGAAGCC ACCGGCGCCG TGCGTCCGTT CATCGAGGTG
TTGGCCGAAA CCCTGGGCAC CCTTCCCGAA GGGGTGGGCG ACAGGCTGAT CGGCCATACC
TTCGGCATCG AGGTCAGCAA GGAATTATTC GTGCGCTCGG TCTCGCGCAT CGATCTGGCG
GCGGGAACGG TGTCGTTCTT TTGCGACGTC AATCGCGGCG ACCGGCTTGA ATTGCTCGAC
GCCACCGATT TCGTCGAACA GACGCGGCGC GATGTCGTTG ATTTCCTGCG CGACAAGCCC
CCGCCGCTGG GGGTTCTGCT CAACGACTGC ATCTTGCGCC GCCTCAACAA CGAACCGGCC
CTGGCCGGTC TCAATGACCT GTGGCTGACC GAGACGGCGG GGTTTTCGAC CTTTGGCGAG
CTGCTCGGCA TCAATATCAA TCAGACCCTG ACGGCGGTCG CCTTTTTCGA CGATCCCGAC
GGCGCCTTCC ATGATTCCTT CGTCGATGGC TTTCCCCTGC ATTACGCCAG CTATTGCAGC
TATTTCACCC TGACCCGGCT GCACCGCCTG GAAAGTGTCG CCCGGCTGCG CGCCGATATG
ACCACCCGGC TGATCCACCA TCTGGGCGCC AGCCCCGATC TCGCCGCGCT GATCGAGGGC
ATGGTCGATT CCTCGCCCGA TGTCGGGGCG ATGCTAAGCG GGATCCGCGC CGCCATCGCC
CGCGATCTCG CCGCCGAGGA ACGGGTCCGT CAGGCCGAAC GCCAGCTTAA GGAGGCGATC
GAGACGATCA ACGACGGCTT CGCCTTTTAT GACGCCGACG ACCGTCTGGT GATCTGCAAC
GCCCAATACC GCACCACCTT CGCCGGGGCC GAAGACGCGA TCGAGCCCGG CAACACCTTT
GGCGACATCG TGCGCGACAT CGCCGCGCGT GGGGTGTTTT GCCAGGAGGG CGCCGATCTG
GAACGCTTCG TCGCCGAGAG GCTGGCCGAG CATCGGGCGC CCACCGGGCG TGGCCAGCTC
CACCGGGTGA GCGATGGCCA TTGGATCGTC AGCAAGGAAT TCCGCATGCC CGGCGGCGGG
GTGGTGGCCA CGCGCACCGA TGTCAGCGAA CTCAAGCGCC GCGAGGAGGA GGTCGAGGCG
CTGAAGCGGC GCTATGAGCT GATCTTGCGC TCGGCCGGCG ACGGCATCGT CGGCATCGAT
CGGGATGAAA CCATCATCTT CGCCAATCAG GCCGCCGGAG CGATGTTGGG CCGCCCCGCC
GAGACCCTGA TCGGCTGCCC GTACCGGCCG GTGCTGAGCG GCGGGGTCGA GGCCCCCTTC
CTGCCGGCCT TTCCCCTGCT TGGGGAAACC GGCCTGACCG GCGAGGGGGT GTTCCTGCGC
GATGGCGGAA CCGATTTCAT CGCCGAATTC ATGTTGGCGC CGATCCGCGA AACCGCCACC
TTCGAAGGCG CCGTGCTGGT CTTTCGCGAT ATCTCGCTGC GCAAGCATTA CGAGGCCGGG
ATCGTCGACC AGCAGCGCCG GCTTGAGGAA GAGGTCGCCG AGCGCACCTT CAAGCTCTCG
GCCGAAATCA GCATGCGGTC GCGGGTGGAA AACGTTCTGC GCGATAGCCA GGGACGCATG
CGGGCGATCG CCGCCAGCCT GTTTGAGGGC GTTCTGTTGA TTGATGCCCA TGGCATCATC
GTATTTGCCA ATAAATCCGC CTATCGCTGG CTGGAAACCG TTGATCTGGT CGATCATGAA
CTCGACGAGG TGCTGAAGCT GCGCGGGACG GGGCGGTTGA TCGATTTCGC CGAGGGGCCC
TTCCGCCGGG TCATCGACAG CGGCGAGACG CTGATCGACG ATGACGCCGC CTTCGTTGTC
GGCTCTGGCC ATGTGGTGAG CGTCGCCTAT GCGGCCTCGC CGCTGGAGGA GGGCGGCAAG
CGGCGGATCG CCGTTTTGTC GTTCCGCAGC ATCGACGCCC TCAAGGAAGC CCAGCGCGAG
GCGCTGCAGG CCTCGCGATT GGCCAGCGTC GGTCAGCTCG CCGCCGGCAT CGCCCATGAG
ATCAACACCC CCATCCAATA TATCGGCGAT AATCTGCGCT TCATCGAAGG GGCCTTGGGC
GAATTGGGCG GGGTGCTGGC CGATCTGCGG GCCCTGGCGG CGCGCGGCGG ATTGGAAGCC
GAGGCCGATG GCTGTTTCGC CGCCAAGGAT ATCGCCTATC TGATGGAGGA ATTGCCGCTG
GCGGCCACCC AATCGCTTCA GGGCGTCGAT CATGTCGCCC ATATCGTGCG CTCGATGAAG
GAATTCTCCC ACCCGGGGAC CACGGCCAAG GTGGCGACCG ATATCAATCG CGCCATCGAC
AGCACCCTGA CCGTCTCGCG CAATGAATGG AAGCAATTGG CCCAGGTCGA GACCGACCTG
GATGACGATT TGCCGCTGAT CTTGTGCTTC GCCGCCGAGA TCAATCAGGT GCTTCTCAAC
CTGATCGTCA ATGCCGCCCA TGCCATCGAG ACCGTGCGCG CCGAGGGCCA GCTTGGCACC
ATCCGCATCG CCACCCGCGG CGAGGCCGAA TGCATCGAAA TCCGCATCAC CGACAGCGGT
CCCGGGGTGC CGCCAGCCAT CCGCGACAAG ATCTTCGATC CCTTTTTCAC CACCAAATCG
GTGGGCAAGG GAACGGGGCA GGGGCTTTCC ATCTGCCGCG ACGTGGTGGT GACCAAGCAC
GGCGGAAAAA TGTACCTCGA TACCAGCGTT GCCCCGGGCG CCTGTTTCGT CGTCCGCTTG
CCGATCGGCA ACGCGGAATA A
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| Protein sequence | MARATQDKTL MASPAPAGLP DGRMVRVREA GPDLAGVDEA SFGFSGRPAA LALAFVSPHL
DFAEVLEGLR RLAGPTPLIG VSSFGGLCAS CPGGGLYRSA GPEAPGIILQ VFSAEVIGTV
SIQSVFLHNA DIRGEQPSLE RDTRVARIGA DLAEIALPFA LDARDSLALT FVDGLSACEN
YLMEAIYESA RFPCLFVGGS AAGTLEFRHT YLFDGQRVLE DHAVLVFIKL APGKRYGILK
SQNFVKSGVA FSVVEADADR RTVTSVLDEA TGAVRPFIEV LAETLGTLPE GVGDRLIGHT
FGIEVSKELF VRSVSRIDLA AGTVSFFCDV NRGDRLELLD ATDFVEQTRR DVVDFLRDKP
PPLGVLLNDC ILRRLNNEPA LAGLNDLWLT ETAGFSTFGE LLGININQTL TAVAFFDDPD
GAFHDSFVDG FPLHYASYCS YFTLTRLHRL ESVARLRADM TTRLIHHLGA SPDLAALIEG
MVDSSPDVGA MLSGIRAAIA RDLAAEERVR QAERQLKEAI ETINDGFAFY DADDRLVICN
AQYRTTFAGA EDAIEPGNTF GDIVRDIAAR GVFCQEGADL ERFVAERLAE HRAPTGRGQL
HRVSDGHWIV SKEFRMPGGG VVATRTDVSE LKRREEEVEA LKRRYELILR SAGDGIVGID
RDETIIFANQ AAGAMLGRPA ETLIGCPYRP VLSGGVEAPF LPAFPLLGET GLTGEGVFLR
DGGTDFIAEF MLAPIRETAT FEGAVLVFRD ISLRKHYEAG IVDQQRRLEE EVAERTFKLS
AEISMRSRVE NVLRDSQGRM RAIAASLFEG VLLIDAHGII VFANKSAYRW LETVDLVDHE
LDEVLKLRGT GRLIDFAEGP FRRVIDSGET LIDDDAAFVV GSGHVVSVAY AASPLEEGGK
RRIAVLSFRS IDALKEAQRE ALQASRLASV GQLAAGIAHE INTPIQYIGD NLRFIEGALG
ELGGVLADLR ALAARGGLEA EADGCFAAKD IAYLMEELPL AATQSLQGVD HVAHIVRSMK
EFSHPGTTAK VATDINRAID STLTVSRNEW KQLAQVETDL DDDLPLILCF AAEINQVLLN
LIVNAAHAIE TVRAEGQLGT IRIATRGEAE CIEIRITDSG PGVPPAIRDK IFDPFFTTKS
VGKGTGQGLS ICRDVVVTKH GGKMYLDTSV APGACFVVRL PIGNAE
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