Gene Rru_A0576 details

Gene Information

• Locus tag: Rru_A0576
• ID: 3834466
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: +
• Start bp: 683909
• End bp: 685975
• Gene Length: 2067 bp
• Protein Length: 688 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637824660
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_425667
• Protein GI: 83591915
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCATTGC GATCAAAGAC TCTGACGACC GTTCTGGTCG GATTCTTTAT CGGTTACGGG 
ATTCTGGTCG GCATCGCCTG GATCACCCAA CGCGACGAGG CCGAACGGAC CGGGCGCGCC 
GAACTGGATC TGGAGGCCCG CGCCCAGTCG CGGATCGCCG GCGAATTCGT CGGCGAGGTG 
TTGACGGCGA CGCGGACCAT GGCCGGGGCG ATCAGCGGTC TGGTCGGCGA TGACCTGCGC 
GACCGCGAGG TCGTGGGGCG GCTGGTGCGC GAGACGGTGC GCATCAACCC CGCCGTGGTC 
GGCGGCGGCA CCGGCTGGGC GGCCGATGGC TTCGACGGGG CCGACGCGTC GTTCCCGGGC 
AAGGCCTTCT CCGACGCCAA GGGCCGCTTC GTTCCCTATT TCTATCGCCA AGCCGATGGT 
CAGATTGGCT TCGAGCCGCT GGTCATGGAC GATGTGCAAT CCACCGAGTC CTGGTACGGC 
TTTCCCTTGC GCGAGGGCCG GCCGACGGTC ACGCCGCCCT ATCTTTACCC GGTCAACGGG 
GTGGAGGTGC TGATGACCAC CGCCTCGGCG CCGATCATCG GCAAGGAGGG CAAGGCGGTC 
GCCGTGGCCA CCTTGGATAT GGCGCTCGAA ACCATCCAAC GCCAAATCGC CGATATCCAT 
CCCTTCGGCG CCGGCTTCGC CGCCGTCTTG TCGGCCGATG GCCAATGGGT CGCCCATCCC 
GACACGGCCC GCCTCGGCCG GCCGGCCGAT CACGCCGAAG TGGGCGAGAT CCTCGCCGCC 
ACCGCCGCCG GTCGTGCCCT GCAAGACACG GTGTCCGATC CGCAGACCGG CGAGCCTTTG 
CTGCGGGTGG CGGTGCCGAT CGCCTTTTCG GGGGCGCCGG AAACCTGGGC CTTTATCCTC 
AGCGTTCCCG AATCCGCCGT GATGGCCGGG GCGATCGAAA CCCGCAACCG GCTGATCTTC 
GCCGGCCTGG GCGTGCTCGC CCTGTCGCTG ATCGGCTTGT GGCTGCTTTC GGGGCGGCTG 
GTCGGGCCGA TCACCCGCAT GACGGCGCTG ATGCACCGGC TAGCGGCGGG CGATACCGGC 
GTGGTGGTGA CGGGAACCGA ACGCGGCGAC GAATTCGGCG AGATGGCCAA GGCGCTTCAG 
ACCTTCAAGG ACAACGCCCT GGCCAAGATC GCGCTGGAGG AGGAGGGCGA GAGGGCCAAA 
CGTCAGGCCG AGGAGCGCCG CCGCGCCGAT CTGGCCACCC TGGCCGACCG CTTCGAGCGT 
GAGATCGAAG GGCTGGTCAC CCTGGTGGGG ACCGCCGTCG ACCAGATGAC CAAGGGGGCC 
GGCCGGTCGG TCGAGCGCAC CGAGGCCAAT GCCCTTTATT CCGATCAGGC GGCGCGGACC 
GCCGAGGAAA TGGCCGCCGA TATCGGCCGG GTCGCCGAAG CCGTGGAGGA GATGGCGCGC 
GCCGTGACCG GCATCGGCGA GCGGGTGACG CGGGCCAATG CCATCGCCGT CGAGGGCGGC 
AGTTCCGCCC GCGCCGCCGT CGGCCGGGTC TCGGCCCTGG TCGGCGCGGC CGATCGCATC 
GGCGATGTCG TCACCCTGAT CACCACCATC GCCAGCCAGA CCAACCTGCT GGCCTTGAAC 
GCGACGATCG AGGCGGCACG GGCCGGTGAT GCCGGCAAGG GCTTCGCCGT GGTCGCCGGC 
GAGGTCAAGA CCCTGGCCAA TCAAACGGCG CGGGCTACCG AACAGATCGC CGAACAGGTG 
GCGGCCATCC AGCGCGAAAC CGCCGATGCC GCCCGCGAGA TCGAAAGCGT CGCCGGGGTG 
ATCGGCGCCA TCGGCGATCT CAACGCCCAG GTCGCCCAGG CCATCGGTGA TCAGGGGCAA 
GCCGTGGCCG GGATCGGCCA GATCGTCGTC GCCACGGTCA GCGGCGCCGG CAGCTTAAGT 
GAAACCGCCC GGGGGGTCGC CGCCCGCTCG GCCGAGGGCG GCGAGGCGGC CCGCGCCATG 
GGCCGCGATG TCGCCGATCT GCACCAGCGG GTCGGCGAGC TTGGCAAGAC CGTCGACGCC 
TTCGTCGGCT CGCTGCGCGC CGGCTGA 

 

Protein sequence

MSLRSKTLTT VLVGFFIGYG ILVGIAWITQ RDEAERTGRA ELDLEARAQS RIAGEFVGEV 
LTATRTMAGA ISGLVGDDLR DREVVGRLVR ETVRINPAVV GGGTGWAADG FDGADASFPG 
KAFSDAKGRF VPYFYRQADG QIGFEPLVMD DVQSTESWYG FPLREGRPTV TPPYLYPVNG 
VEVLMTTASA PIIGKEGKAV AVATLDMALE TIQRQIADIH PFGAGFAAVL SADGQWVAHP 
DTARLGRPAD HAEVGEILAA TAAGRALQDT VSDPQTGEPL LRVAVPIAFS GAPETWAFIL 
SVPESAVMAG AIETRNRLIF AGLGVLALSL IGLWLLSGRL VGPITRMTAL MHRLAAGDTG 
VVVTGTERGD EFGEMAKALQ TFKDNALAKI ALEEEGERAK RQAEERRRAD LATLADRFER 
EIEGLVTLVG TAVDQMTKGA GRSVERTEAN ALYSDQAART AEEMAADIGR VAEAVEEMAR 
AVTGIGERVT RANAIAVEGG SSARAAVGRV SALVGAADRI GDVVTLITTI ASQTNLLALN 
ATIEAARAGD AGKGFAVVAG EVKTLANQTA RATEQIAEQV AAIQRETADA AREIESVAGV 
IGAIGDLNAQ VAQAIGDQGQ AVAGIGQIVV ATVSGAGSLS ETARGVAARS AEGGEAARAM 
GRDVADLHQR VGELGKTVDA FVGSLRAG