| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0507 |
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| Symbol | |
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| ID | 3834205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 599246 |
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| End bp | 602065 |
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| Gene Length | 2820 bp |
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| Protein Length | 939 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637824591 |
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| Product | Alpha amylase, catalytic region |
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| Protein accession | YP_425598 |
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| Protein GI | 83591846 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3280] Maltooligosyl trehalose synthase |
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| TIGRFAM ID | [TIGR02401] malto-oligosyltrehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.213544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCG ATCTCTATGC GCCGACCGCC ACCTATCGGC TGCAGTTCCA TGCCGGGTTC
ACCTTCACCG ATGCCGCCGC CCAGGTTGGC TATCTGCGCG ATCTGGGGGT CAGCCATCTT
TACGCCTCGC CCATTCTCAA GGCGCGGCCG GGATCGACCC ATGGCTATGA CATCATCGAC
CATGGCGCGC TCAATCCCGA ACTGGGCGGC GAGCGCGGCT TCGCCCAGTT ATCCGAGGCG
CTGGCCGGCG CCGGCCTGGG GTTGATCATC GACATCGTGC CCAATCACAT GGGCATTGGT
GCGGCTGATA ACGGCTGGTG GCTGGACGTG CTGGAATGGG GGCGCGGCGG ACGCTACGCC
GGCTATTTCG ATATCGACTG GTTTCCCGCC ACCCCGGGCT TGCGCGAAAA GGTGGTGCTG
CCGGTGCTGG GCGATCTCTA TGGCCGGGTG CTCGATGCCG GCGATCTGGT GGCGCGCTTC
GATGACGCCG ACGGCTCGTT CAGCATCTGG TACCACGAGC ATCGCTTTCC GGTCTGCCCG
GCGACCTATG CCACTATTCT GGATCTGTGT CTGAAAGAGG TCGCCCTGCC CGAGGCGGCG
GCCCTGATGA CCGAGGCCCG GCGGCTGCGC GGCACCCCGC GCTCCGATAT TCGCCGCAAA
GCCCAGCGCA CCCGGGGCGA GACCTTCAAG CGCAGCCTGC GCGAGGCGGC CGCCACCCCG
GCCCTGGCCG CAGCCCTGGC CTCGGTGACC ACGCTGTTCG GACCGGCCGC CACTGACGGC
AAGGGGCTGA CCCGTCTGCA CGCCCTGCTC GAAAACCAGC ATTACCGGCC CTCGTTCTGG
CGGATCGCCG GCCATGAGAT CAATTACCGC CGCTTCTTTC AGATCAATGA TCTGGCCGGC
TTGCGGGTCG AGGAGAAGGA GGTCTTCGAC GCCTCGCACG CCCTGATCGG CGACCTTGTC
GGCAGCGGCC GGGTGCATGG GGTGCGGGTT GATCATATCG ACGGCCTGCT TGACCCCCAT
CAGTATCTTG ATCGCCTTCA AGGCCTTGTC GCGCCCTTTG CCGAGACCCT GGGGTTCCGG
CCGGGGGCCT TTCCGGTCTA TGTGGAAAAG ATCCTGGAGC ACGGCGAAGC CCTGCGCCGC
GACTGGCCGA CCGCCGGCAC CACCGGCTAT GACGCCCTGA ACGAAATCTC GACGCTGTTC
GTTGCCGCCC CCGGGCTGGA AACCCTGCGC GCCCTGTGGC GGCGCGAGGT CGGCGACGAG
GCGGCCGATC CGGTGCGGGT GGCGGTGAGA GCCAAGCGTC AGGTGATGGA CGAGGAACTG
GCCTCCGAGC TCGAGGTGCT GACCGATCAG TGCACCCGTC TGCTCAAGCG CGATCCGCAG
ACCCGCGATT TCAGCCGCGC CGGCATCAAT CGGGCGCTGC GCGAGATCGT CGCCCAGTTC
CCGGTCTATC GCAGCTATAT CGGGCCCAAG GGGGCGACGC CCGAGGACCG CGCGGTGATC
GCCACCGCCA TCCGCCGGGC GCGGCGGGCC CGCGCCGTCA GCCATGGGGC GCTCTATGAC
GTGCTGGACG AGGTGCTGAC CGGCCAATGG GGCAAGGGAG TGGGCGGACG GCCCCGGGTG
GCGGTCTTGC ATCTGGCGCG CAAGGTTCAG CAATATACCG GCCCGGTGAT GGCCAAGGGC
ATGGAGGACA CCACCTTTTA CCGGGTGATG CCGCTGGTTT CCTTGAACGA GGTCGGCGGT
GGTCCCGGTC TCACCCCCCT GGATGGGGCG GCCTTCCATC AGGGGATGGC CGAGCGCCAG
CGCTTTCTGC CCCGCGCCCT GGTGGCGACG GCGACCCACG ATACCAAGCG CGGCGAAGAC
GTGCGGGCGC GTCTGCATGG GCTGAGCGAA TGTCCCGAGC GATGGGCGGA GCGGCTAAGC
GCCTGGCGCG AGATCCTGGC CCCGCTCTGC CAAACGGTCG AAGGCGAGGT TTGGCCAAGC
CCGGCCGATC AGATCTTGTT CTTGCAAACC CTGGTTGGCA TCTGGCCGGC GGGGTTGGAC
GCCACGGCGC CGGTGCCGCC GACCCTGCTC GACCGTTTGC GGGCCTATAT GCGAAAAGCC
GCGCGCGAGG CCAAGACCCA TACCTCGTGG ACCGATCCCG ACGAGGACTA TGAAGCGGCG
CTGGAGGCTT ATGGGGTGGG GGCGCTGACC GGCGAGCCGG CGCCCAAGAT CCGCCGCGAG
GTGGCCGAGC TGGTCACCCA CCTGGAGGGA CCGGGGCGGA CCACCGCGCT TGCCCAGCTT
ACCCTGCGCC TGACCATTCC CGGGGTGCCC GATACCTATC AGGGGACCGA GCTTTGGGAT
GATTCGCTGG TCGATCCCGA TAACCGGCGG CCGGTGGATT TCGCCCTGCG CCGGGAAAAG
GCCGCCGATC TGGCCGGGGT TGGCGGGGCC GCCGTTGAAA AACTGCTGGC CGATCCGGCG
GGCGCGGCGA AGATGCTGGT TCTGACCCGC CTGCTCGCCT TGCGCCGACG GCTGCCCGAT
CTGTTCCTTG AAGGCGGCTA CGAGCCTTTG ACCGTCACCG GCAAGGCCGC CGGGCATGTG
GTGGCCTTTC TGCGCCGTCA CGGCGAGGCC ACGCTGCTTG TCGCCGTGCC CCGGCTGACG
ATGACGCTCT CCGGCGAGGG GGCTTCCGTG GCCAAGGCCT GGGGCGATAC CACCCTGGTC
CTGCCCGACC GCCTGCCGCT GGAAGGCTGG ACGGATTGCC TGTCGGGAGA TCGGCTGGCC
GATCTCCCCT CCTGCGCCAC GCTGTTCGCC CGGCTGCCGG TGGCGGTGCT GCTGGGCTAG
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| Protein sequence | MTADLYAPTA TYRLQFHAGF TFTDAAAQVG YLRDLGVSHL YASPILKARP GSTHGYDIID
HGALNPELGG ERGFAQLSEA LAGAGLGLII DIVPNHMGIG AADNGWWLDV LEWGRGGRYA
GYFDIDWFPA TPGLREKVVL PVLGDLYGRV LDAGDLVARF DDADGSFSIW YHEHRFPVCP
ATYATILDLC LKEVALPEAA ALMTEARRLR GTPRSDIRRK AQRTRGETFK RSLREAAATP
ALAAALASVT TLFGPAATDG KGLTRLHALL ENQHYRPSFW RIAGHEINYR RFFQINDLAG
LRVEEKEVFD ASHALIGDLV GSGRVHGVRV DHIDGLLDPH QYLDRLQGLV APFAETLGFR
PGAFPVYVEK ILEHGEALRR DWPTAGTTGY DALNEISTLF VAAPGLETLR ALWRREVGDE
AADPVRVAVR AKRQVMDEEL ASELEVLTDQ CTRLLKRDPQ TRDFSRAGIN RALREIVAQF
PVYRSYIGPK GATPEDRAVI ATAIRRARRA RAVSHGALYD VLDEVLTGQW GKGVGGRPRV
AVLHLARKVQ QYTGPVMAKG MEDTTFYRVM PLVSLNEVGG GPGLTPLDGA AFHQGMAERQ
RFLPRALVAT ATHDTKRGED VRARLHGLSE CPERWAERLS AWREILAPLC QTVEGEVWPS
PADQILFLQT LVGIWPAGLD ATAPVPPTLL DRLRAYMRKA AREAKTHTSW TDPDEDYEAA
LEAYGVGALT GEPAPKIRRE VAELVTHLEG PGRTTALAQL TLRLTIPGVP DTYQGTELWD
DSLVDPDNRR PVDFALRREK AADLAGVGGA AVEKLLADPA GAAKMLVLTR LLALRRRLPD
LFLEGGYEPL TVTGKAAGHV VAFLRRHGEA TLLVAVPRLT MTLSGEGASV AKAWGDTTLV
LPDRLPLEGW TDCLSGDRLA DLPSCATLFA RLPVAVLLG
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