Gene Rru_A0452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0452 
Symbol 
ID3833786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp529650 
End bp529988 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content59% 
IMG OID637824536 
ProductCRISPR-associated Cas2 family protein 
Protein accessionYP_425544 
Protein GI83591792 
COG category[S] Function unknown 
COG ID[COG3512] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01573] CRISPR-associated endoribonuclease Cas2 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.220536 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGACG GGTGGCGGAA GATGGGAGTG CTGGTGTTTT ATGATCTGCC GGTGGTCAGC 
CCGGAGCAAC GGCTGGCGGC GGTGCGGTTT CACAAATTCC TGCTCGCCGA TGGCTTCGAG
CGCATGCACT ACTCGATCTA TGCCCGCTAT TGCGGATCGA TGGAACGCGC CGCCACCTAT
GAACGACGGG TGGAACAGGC CTTGCCCGCC GTCGGGCATG TCAATTTATT GAAATTGACC
GATCGCCAGA TGGTCGGCAT GCGCAAATGG ATCCGTGGCA ACTACCGAGC CCCGGAAAAT
GCCGAGTTCG TGCCCCCAGC CCAGTATCAA CTCTTCTGA
 
Protein sequence
MPDGWRKMGV LVFYDLPVVS PEQRLAAVRF HKFLLADGFE RMHYSIYARY CGSMERAATY 
ERRVEQALPA VGHVNLLKLT DRQMVGMRKW IRGNYRAPEN AEFVPPAQYQ LF