| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0427 |
|---|
| Symbol | |
|---|
| ID | 3833993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 499592 |
|---|
| End bp | 500362 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637824511 |
|---|
| Product | Short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_425519 |
|---|
| Protein GI | 83591767 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCTC CGCGAACGAT CCTGATCACC GGCGCCTCCA GCGGCCTGGG GGCGGCGCTG
GCGCGCGGCT ATGCCCGCCC CGGCCGGCGG CTGGTTCTGG GCGCCCGCCG CGCCGAGGCC
CTGGCGGCGA TCGCCCAAGA TTGCCGGGCC GCCGGCGCCA TCGTTGAAAC CGCCCTGGTC
GATGTGACCG ACCGCGCCGC CACCGCCGCC TGGGTCATCG CCGCCGACGA GGCCGGAGCC
CTGGATCTGG TCATCGCCAA TGCGGGAATT TCCGGGGGAA CCGGCGGCGG CGGCGAGGCC
GCCGAGCAAA CCCGGGCGCT GTTCGCCGTC AATGTCGACG GCCTGTTCAA CACCCTCTTG
CCGATTATCC CGCGCTTTCG CGCCCGCAAG CGCGGCCAGA TCGCCGTGAT GGCCTCGCTC
GCCAGCTTTC GCGGCACCCC GGGCGCCCCG GCCTATTGCG CGAGCAAGGC TGCGGTCAAG
GTCTGGGGGG AAGGGATGCG CGGCGTTCTG GCCGACGACG GCGTCGAGCT CAGCGTCATC
TGCCCGGGCT TCGTGCGCAC GCCGATGACG GCGGTCAATG AGTTCCCCAT GCCCTTCCTG
ATGGAGGCCG ACAAGGCGGC CCGGCTGATC GCCCGCCGGC TGGAAGCCAA TGCCGGGCGC
ATCGCCTTCC CCTGGCCGAT GGCCTTCGGC GCCTGGATGA TCGCCGCCCT GCCCGAGGCC
CTGGCCGGCC GCCTGCTGGC GCGAACCCCG CGCAAACCCG CCGGTTTCTG A
|
|---|
| Protein sequence | MKSPRTILIT GASSGLGAAL ARGYARPGRR LVLGARRAEA LAAIAQDCRA AGAIVETALV
DVTDRAATAA WVIAADEAGA LDLVIANAGI SGGTGGGGEA AEQTRALFAV NVDGLFNTLL
PIIPRFRARK RGQIAVMASL ASFRGTPGAP AYCASKAAVK VWGEGMRGVL ADDGVELSVI
CPGFVRTPMT AVNEFPMPFL MEADKAARLI ARRLEANAGR IAFPWPMAFG AWMIAALPEA
LAGRLLARTP RKPAGF
|
|---|
| |