Gene Rru_A0346 details

Gene Information

• Locus tag: Rru_A0346
• ID: 3834633
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: +
• Start bp: 418329
• End bp: 419060
• Gene Length: 732 bp
• Protein Length: 243 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637824429
• Product: CRISPR-associated Cse3 family protein
• Protein accession: YP_425438
• Protein GI: 83591686
• TIGRFAM ID: [TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCCGC TTTATCTGAT CAGCCTGCCT TTGGACATGG TGTCCTTTCA TCGCTGGGCC 
GGCCAGCGCG GCATCGGCAC CGATGAAGGG CGCGCCTTGC ATCACCTGCT TGGCGAGAGC 
TTCGGCAAGG GTGTCCTTCA GCCGTTCCGC TTGATGGTGG CGCCCAATGG CGCCACCGGC 
ACGCTTTACG CCTATACCCG CGCCGATAGG ACGGCGCTTG TTCAGACGAC GCGGGACTTT 
GGTCTGCCCG ACGCCTTGGC CGTTTGCGAT CCCGCCCGGC TGGCCGCCAA GGCCATGCCC 
GAGGACTGGC GCGAGGGACG CCGTCTGGCC TTTGACCTGC GGGCGCGGCC GGTTCGCCGG 
CTTTTGAAAC CGGCCGGGGT TTTCCCCAAG GGGGCGGAAG TGGATGCCTT CCTGCTTGAG 
GCCCTCCGCC GTTTTCCCGA GGGGCGGCCC GCCGAGGGGG TGGCCGGCGC GCCGATCACG 
CGCGAAGGGG TCTATTTCCA ATGGCTGGCC GAGCGTCTGT CCGGCGCGGC CCGGGTGGAG 
GAGGTACGGC TGGCCCGCTT CGAGCGCCGC GCCGTTCTGC GTGGCAGTAA ATCCATCGAA 
GGCCCGGATG CGGTCTTCCA TGGGGAACTG GTCATCCTTG ACGGGGCGAA ATTCGCCGGG 
CATCTGGCGT CTGGCCTTGG CCGACATACC GCTTACGGCT ATGGCATGAT GCTTCTGCGT 
CCGGCGCGAT AG 

 

Protein sequence

MTPLYLISLP LDMVSFHRWA GQRGIGTDEG RALHHLLGES FGKGVLQPFR LMVAPNGATG 
TLYAYTRADR TALVQTTRDF GLPDALAVCD PARLAAKAMP EDWREGRRLA FDLRARPVRR 
LLKPAGVFPK GAEVDAFLLE ALRRFPEGRP AEGVAGAPIT REGVYFQWLA ERLSGAARVE 
EVRLARFERR AVLRGSKSIE GPDAVFHGEL VILDGAKFAG HLASGLGRHT AYGYGMMLLR 
PAR