Gene Rru_A0327 details

Gene Information

• Locus tag: Rru_A0327
• ID: 3834044
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: +
• Start bp: 398582
• End bp: 400444
• Gene Length: 1863 bp
• Protein Length: 620 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637824409
• Product: periplasmic sensor Signal transduction histidine kinase
• Protein accession: YP_425419
• Protein GI: 83591667
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0642] Signal transduction histidine kinase

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGATGG TGGGTGCAGG CTCGTTCCAA ACACCAGGCG GGGTGCCGCC CTTACCCCCG 
CCGCCCCGCG AAGGAGCGAC GGGGCGGTCG TTATCGGCCA AAGCCAGGGC CCCCACCGTC 
TTGGGCCTGC TGGCCGCCGT CGTCCTTGTC ATGCTCACTC TGGGGCTAGG GGCCAATCTG 
GTTTTCCTTT ATCGCGACGG CGTGGAGCGC GGCGAGGCCC AGGTTCTGGC GCTGCGCGAT 
GGCGCGCGCG AACAGGCCGC TGCGGCGGTC TCGCGAATCG ATCTTCTGCT CTCGGGCCTG 
ACCGAGGGGT TGGCGTTGCG TCCCGAGGTC GAGCGCTGGG GCGATGCGGG CATTCATGCC 
CTGCTGGTGC GCCAAAGGGC CCTGCTGCCG ATGGTGCGCG GGATCATCGT CACCAATGAG 
GCCGGGCGGC TGACCCATGA TAGCGAGGCG GCGATTCCGG CGAATATGGA CCTGTCCGAC 
CGCGATTATG TGCGGGCCTT GCGGGCCGAT CCGCAAAGCG GCCTTTACAT CGGCGAACCG 
GTGCGCGGGC GCACCTCGGG CCGGTGGTTC ATCAGCATGA GCCGGCGCTT CACCGACCAG 
CAGGGCGCCT TCAAGGGGGT GGTTACCGCG GTGGTCGATC CGGTGGCCCT GGGGACCGTC 
TTTTCGCCGT TTCTGCCCGG CGCGGGGGGA GAGTTGGAGG TGCTGCGCGA CGACGGGCGG 
GTGCTGCTGC ATCTGCCCGA TTTCGAACGC TTCATGGGGG CGGCCCGCGG GCACCAGTCC 
TTTTTCCGCG ATGTCCTGGC CGCGGCTCCC AGCGGATCCA TCCGGGTCGC GGGCTCGACC 
GAAGAATCGG TCTATCGCCT GGAGGGCGGA GAGGCCGGGC TGTTCTTCAC CTGGGCGACG 
GTTCCGGGAT CGCCGCTTCT GGTCACGGTG TCGGCCTCTT ATGACGGGCT GCTGCGCTCC 
TGGTGGCAGG TCCTGCCCTA TCACCTGGGG GCGATCGCCT GCATCATCCT GGTTATCCTG 
GCCCTGGTGC TGAAGGTCCA TCGCCAGATC CGCCATCTCA ACGGCTTGAT CGTCGCCCTG 
TCGAACCGCG AAGCCGCCCT GGTCGCCGCC CGGCGCTCAA GCGAGGAGGC CAATCGCGCC 
AAAACGCTGT TCCTGGCCAA TATGAGCCAT GAATTGCGCA CGCCGTTGAA CGCCATCATC 
GGCTTTTCCG ACATGCTGGC GAACGGCATT CACGGCGCCT TGGCCGATCG TCAGCAAGAC 
TATGCCCGCG ATATCAATCT GTCGGCCCTT CACCTGCTCG ATCTGATCAA CGACATCTTG 
GATGTCGCCA AGATCGAATC CGGAGGGTAC CTGCTGCACG AGCGGCCGTG CAATCTGGCC 
GCGATCATCC GCGCCGCCGA GCGCATGCTG GGCCCCCGCG TCCGCGAAAA AGGGCTGGTA 
ATGGATACGG TCTGCGTCGA TGGCGAGGCC TGGGTGATGG CCGATGAGCG GGCCATGCAG 
CAGGTGCTGC TCAATCTGCT GTCCAATGCG GTCAAATTCA CCCCCGAGGG CGGGCGGATC 
ACCGTTTCCC TGGGGTTGAA CGAGGGCGGC GGCATGGTTC TGGTGGTGGG CGACACCGGT 
CCGGGCATTC CCGCCGAGCA TCTGGCCCTG GTGCTCGAGC CTTTCTATCA GGTGGGCGAG 
GTGGAAACCC GCAGCCACGA GGGAACCGGC CTGGGCCTGC CGCTGGCCAA GGCCCTGGTC 
GAAAAGCACG AGGGCGCGCT GCGCCTGGAC AGCCAGCCTG GACAGGGCAC CCGGGTCAGC 
GTAACCCTGC CCGCCGCCCG CGTTCTGCCG CCGCAACGGC CGCCGGTCGA GGCCAAACCT 
TGA 

 

Protein sequence

MMMVGAGSFQ TPGGVPPLPP PPREGATGRS LSAKARAPTV LGLLAAVVLV MLTLGLGANL 
VFLYRDGVER GEAQVLALRD GAREQAAAAV SRIDLLLSGL TEGLALRPEV ERWGDAGIHA 
LLVRQRALLP MVRGIIVTNE AGRLTHDSEA AIPANMDLSD RDYVRALRAD PQSGLYIGEP 
VRGRTSGRWF ISMSRRFTDQ QGAFKGVVTA VVDPVALGTV FSPFLPGAGG ELEVLRDDGR 
VLLHLPDFER FMGAARGHQS FFRDVLAAAP SGSIRVAGST EESVYRLEGG EAGLFFTWAT 
VPGSPLLVTV SASYDGLLRS WWQVLPYHLG AIACIILVIL ALVLKVHRQI RHLNGLIVAL 
SNREAALVAA RRSSEEANRA KTLFLANMSH ELRTPLNAII GFSDMLANGI HGALADRQQD 
YARDINLSAL HLLDLINDIL DVAKIESGGY LLHERPCNLA AIIRAAERML GPRVREKGLV 
MDTVCVDGEA WVMADERAMQ QVLLNLLSNA VKFTPEGGRI TVSLGLNEGG GMVLVVGDTG 
PGIPAEHLAL VLEPFYQVGE VETRSHEGTG LGLPLAKALV EKHEGALRLD SQPGQGTRVS 
VTLPAARVLP PQRPPVEAKP