Gene Rru_A0326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0326 
Symbol 
ID3833681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp396246 
End bp398447 
Gene Length2202 bp 
Protein Length733 aa 
Translation table11 
GC content64% 
IMG OID637824408 
ProductNifA subfamily transcriptional regulator 
Protein accessionYP_425418 
Protein GI83591666 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.399529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGAGG CGCACAGTCT GGCGGAACGC TACGAACTGT TGCTCGATGT GTCGGAGATT 
CTCGAGCTGA ACCGCGATCT AAATTCGCTG CTCGGCGCGC TTTGCGACCT GCCGGCCAGC
ATTGGTCTGT TCGATTATGT CAATCTGCTG CTCTATGACG CGCCCACCGA TACGATGACG
TTGTTTTCGC AGGGCGATGT CGGCGGCGGC TATGCGCGGA TCGACGGTCT CGCCCCGACC
GAGGGACCGG GGCAGGTGGT CTGGGCCCGT CAACGTCCCT TCGTGTGCAG CGGCGAGGAA
TACCGCCGGC ATTTCCTGAA GATCGCCGCT CTGCGCCGCA ACCAGCGGGT CGGACTGTAT
TGTCAGATGC CGCTGACCAC CAGCCAGCGC CGGCTGGGCG GGGTGGAATT CATCAGTTCA
CGCCCCACTA CCTATGACGA GGATGATCTG ACCTTCCTGC GCCGGGTCGC CTCGGTCATC
GCCATTTCGG TTGAAAACGC CCTGATCGGC GAAATGCGCC AGATGGAGGA GGAGCGTCTG
CGCGGCGAAC GCGATCACAA CCACATTCTG GTCGAGGTGA CCAATGCGGT GATTTCCAAG
CTGAAGCTGG AGGATCTGGT CGACGAGGTG TCGCGCTCCA TTCACCGGTT TTTCGGCGTC
GATTTCGTCT CCCTCGATCT GGTCGATCCG GCCACCGCCA CCATCAAATC GCGCTCGGTC
TATTTCCAGA AGGGGTTGGG GCCGGTCTGG GGCTCGGCCC AGGGGCCGCT TGGCGCCTCG
CCGATGGCAC CCTTGTTCGA GACCAAGGCG CCGCGCATCC TGGCCCGCGC CGATCTGGGG
GCCCTGGCGC GCGGCCATGA TCAGATGACC TTGCTGACCA ACGCCGGTTT CCAAGTGGCT
TGCGGTATCC CGTTGCTTTC GGCGGGGCAT GTTCTGGGGG TGCTGACCCT GGCCAGCCGC
GAGCGCGACA AGTTCACCGA TTACAATATC GGCTTGCTGG GCGAGGTCGC CTCGCGCATT
TGCATCGCCG TGGAAAACGC CCTGGCTTAC GGCGAGATTT CCCGGCTCAA GGACCAGTTG
TCGCGCGAGA ACAAGCAACT GGCCAAGGAA CGCTATTACC TGGAAGAGGA AATCCGCCGC
ACCGAGGATT TCGGCGATAT CATCGGCATC AGCCCGGCCA TTCGCGGCGT TCTCGAACAG
GTGGAGCTGG TCGCCGACAG CGACAGCACG GTGCTGATCC TCGGCGAGAC GGGCACGGGC
AAGGAACTGA TCGCGCGCGC CATCCATATG CTGAGCCAGC GCAAGAAGCG CACGATGATC
AAGGTGAACT GCGCGGCCAT TCCCTCGGCC CTGCTGGAAA GCGATCTGTT CGGCCATGAA
AAAGGCGCCT TCACCGGCGC CATCGCCCAG AAGTCCGGCC GCTTCGAACT GGCCGATCGC
GGCACGCTGT TTCTTGACGA GGTCGGCGAC ATCCCCATCG ATCTGCAGCC CAAACTGCTG
CGCGCCTTGC AGGAGCGCGA AATCGAGCGG GTCGGCGGAC ATCAGCCGAT CCCAGTGGAT
GTGCGGATGA TCGCCGCCAC CAACCGCGAC CTGACGGGCA TGGTCGAGAA GCGGCTGTTC
CGGGGCGATC TGTATTATCG CCTGAACGTC TTTCCGATTC TGATCCCGCC TTTGCGCGAG
CGCCGCGAGG ATATTCCGCT GATGGCGGAT TATTTCATGC GCAAGACGGC GCGCAAGATG
AACCGGGCGA TCGAGGCCTT CTCGGCCGAA ACCATGGATA TGCTGCTTAA CTTGCCGTGG
CCGGGCAATG TGCGCGAGCT GCAAAACGTC ATCGAGCGCG CGGTCATCCT GACCAAGGGG
CCGGTGCTGC ATCTGCCCGC CACCGAACTG CGCCATCATC TGGCGCCCAG CGCCGCCCTG
CCGTCCGAAG ACGCGGTGAT TCCTCTCCGC GCCGCGGTGC TGCCCTCCGC CGCGAGCGCG
CCCGATCCGC TCCCGCCCCC GGCCGGGTCG TCCCCCAATC CCGGCGATCT CGCCGGCGAG
GCGATCGAGC GCGACCAGAT CTTGCGAGTA TTGCGCGAAA CCAATGGCAT CGTCGGTGGT
CCGCGCGGCG CGGCGGCCCA TCTCGGAATG AAGCGGACCA CCTTGCTGTC GCGGATGCGC
CGCCTTGGCA TCTCGCCCAA GGAGGTCGAT CACCGCGCGT GA
 
Protein sequence
MGEAHSLAER YELLLDVSEI LELNRDLNSL LGALCDLPAS IGLFDYVNLL LYDAPTDTMT 
LFSQGDVGGG YARIDGLAPT EGPGQVVWAR QRPFVCSGEE YRRHFLKIAA LRRNQRVGLY
CQMPLTTSQR RLGGVEFISS RPTTYDEDDL TFLRRVASVI AISVENALIG EMRQMEEERL
RGERDHNHIL VEVTNAVISK LKLEDLVDEV SRSIHRFFGV DFVSLDLVDP ATATIKSRSV
YFQKGLGPVW GSAQGPLGAS PMAPLFETKA PRILARADLG ALARGHDQMT LLTNAGFQVA
CGIPLLSAGH VLGVLTLASR ERDKFTDYNI GLLGEVASRI CIAVENALAY GEISRLKDQL
SRENKQLAKE RYYLEEEIRR TEDFGDIIGI SPAIRGVLEQ VELVADSDST VLILGETGTG
KELIARAIHM LSQRKKRTMI KVNCAAIPSA LLESDLFGHE KGAFTGAIAQ KSGRFELADR
GTLFLDEVGD IPIDLQPKLL RALQEREIER VGGHQPIPVD VRMIAATNRD LTGMVEKRLF
RGDLYYRLNV FPILIPPLRE RREDIPLMAD YFMRKTARKM NRAIEAFSAE TMDMLLNLPW
PGNVRELQNV IERAVILTKG PVLHLPATEL RHHLAPSAAL PSEDAVIPLR AAVLPSAASA
PDPLPPPAGS SPNPGDLAGE AIERDQILRV LRETNGIVGG PRGAAAHLGM KRTTLLSRMR
RLGISPKEVD HRA