Gene Rru_A0305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0305 
Symbol 
ID3834462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp372015 
End bp373040 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content69% 
IMG OID637824387 
Producthydrogenase expression/formation protein HypE 
Protein accessionYP_425397 
Protein GI83591645 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0309] Hydrogenase maturation factor 
TIGRFAM ID[TIGR02124] hydrogenase expression/formation protein HypE 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGCC TTGATCTGAC CACCGGCCGC ATCGACATGA CCCATGGCGC TGGCGGCCGC 
GCCATGCAGG GCTTGATCGA ACGGCTGTTC CACGCCGCCT TCGACGATCC CGTGCTGGTC
CGCGCCGATG ACGCCGCCGT GCTGCCCGCC GCCGATGGCC CTTTGGTGAT GAGCACCGAT
GGCTTCGTCG TCTCGCCGCT GTTCTTCCCG GGCGGCGATA TCGGCAGTCT GGCCGTTCAC
GGCACCGTCA ATGACCTGTC GATGATGGGG GCGCGGCCGC TTTACCTGTC CTCGGCCTTT
ATCATCGAGG AAGGCTTCGC CTTGGCCGAT CTGGAACGCA TCGTCGCCTC GATGGCGGCG
GCAGCCCGGG CGGCCGGGGT GCGCATCGTG ACCGGCGACA CCAAGGTGGT GGACCGCGGC
AAGGCCGATG GCCTGTTCAT CACCACCGCC GGCATCGGCG TTGGCCGCGT AGGGGTTCAT
CCCGCCGCCG ACCGTGCCCG CGCCGGTGAT CGCATTCTAG TCAACGGACC GCTGGGCGAC
CACGGCGTGG CCGTGCTGTC GGCGCGCGGC CAGATCGGCC TGAACGTCCC CGTCCACTCC
GATAGCGCCG CCCTCAATGG GCTGGTCGAG GCGATGATCG CCGTCGACGC CGATCTTCAC
TGTCTACGCG ACGCGACGCG CGGCGGGGTG GCGGCCGTTC TCAATGAACT TTGCGACCGT
TCCCGCGTCG GCATGACCAT CGAGGAAAGC GCCCTGCCCG TCCGCCCCGC CGTTCAAGGT
GCCTGCGAGG CCCTGGGCCT TGATCCGCTT GATCTGGCCA ATGAGGGCAA GCTGGTGGCG
GTTGTCGACG CCGCCTCGGC CCAGGCGGTG CTGGCGGCGA TGCGCGCCCA TCCACTGGGC
CGCGACGCCG CCCTGATCGG CACGGTGGTC GACGACCCCG ACCATCTGGT TGAAATGACC
ACCCGCTTTG GCGGCCGCCG CCTGATCCAA TGGCGCGCCG GCGAGGCCCT GCCGCGAATC
TGCTGA
 
Protein sequence
MSRLDLTTGR IDMTHGAGGR AMQGLIERLF HAAFDDPVLV RADDAAVLPA ADGPLVMSTD 
GFVVSPLFFP GGDIGSLAVH GTVNDLSMMG ARPLYLSSAF IIEEGFALAD LERIVASMAA
AARAAGVRIV TGDTKVVDRG KADGLFITTA GIGVGRVGVH PAADRARAGD RILVNGPLGD
HGVAVLSARG QIGLNVPVHS DSAALNGLVE AMIAVDADLH CLRDATRGGV AAVLNELCDR
SRVGMTIEES ALPVRPAVQG ACEALGLDPL DLANEGKLVA VVDAASAQAV LAAMRAHPLG
RDAALIGTVV DDPDHLVEMT TRFGGRRLIQ WRAGEALPRI C