| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0284 |
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| Symbol | |
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| ID | 3833843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 348329 |
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| End bp | 350059 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637824364 |
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| Product | thiamine pyrophosphate protein |
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| Protein accession | YP_425376 |
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| Protein GI | 83591624 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAGTA TTGGATCCAA TATTCAAAAA CACAGTCGGG GAGTGTGCGC CGTGGTCCAG
TCTTCCGTTG CATCGCGTAC GGGCGGTGCC TTGCTTGCCG ACTCGTTGAT CGCCCTCGGC
GCCGATACGG TCTATTGCGT GCCCGGCGAA AGCTTCCTGC CCTTCCTCGA TGCCGTTCAC
GACCGCACCG ACGCCTTGCG GCTGGTGGTC TGCCGGCAGG AGGGCGGGGC GTCCTATATG
GCCGATGCCC ATGCCAAGAT GACCGGCAAG CCCGGGGTGT GCTTCGTCAC CCGGGGGCCC
GGCGCCTGCA ATGCGGCGAT CGGCGTTCAT ACCGCCTTTC AAGATTGCAC GCCGATGCTG
CTGTTCATCG GTCAGGTCGA CCGGCCGATG ATCGGCCGCG AAGCCTTTCA GGAAGTCGAT
ATGACGGCGT TTTTCGCGCC CTTGGCCAAA TTCAGCGCCA CCGCCGACAG CGCCGCCCGC
CTGCCCGAGC TGGTGGCGCG GGCCTGGGCG GCGGCGACCT CGGGGCGACC GGGACCGGCG
GTGGTGGCCT TGCCCGAGGA TGTTCTGGCC GAGATGGCCT TTGCCCGCGA TCCGCTTCCC
CGTCCCCCGG CGCGTCCGGC GCCGCGCGCG GCCGATATGG CCGATCTGGC AAGCCGGTTG
GCGGCGGCCG AGCGGCCGCT GGTCATCGTC GGCGGCGGCA CCTGGACGCC GCGCGCGGCC
AAGCTGGTCA CCACCTGGGC CGAGGCCAGC GGCCTGCCGG TGGTCGCCGC CTTCCGCCGC
CAGGACGTGG TCGACAACCT CAGCCCGGTC TATATCGGCG AACTGGGCTT TTCGGCCAGC
CCGCGCCTTA ACGCCCGCAT CAAGGCCGCC GATCTGATCG TTTGCGTCGG CGATCGACTG
GGCGAGGTCA CGACCCAGGG CTATAGCCTG ATCGAGTCGC CGGTCCCCAG CCAAAGCCTG
ATCCATATTT TCCCCGATGC CGGTGAAATC GGCCGGGTCT ATGCCACCGA TCTGGGGATT
GTTTCGGCGA TGGAGCCCTT CGCCGAGATG CTGAGCCCGG TCGATGGCCG TCATTGGGCC
GGCTGGCTGG CCCAGGGGCG GGCAGACTAC GCCGCCAATC TGCGCGCCGA CCCCTGCCCG
GGTAGCGTGG ACATGGCCCA GGTGATGGCC GAGATCGAGG CCCGCTTGCC CGAGGACGCG
GTGATCACCA ATGGCGCGGG CAATTATTCG GGCTGGGTCC ACCGCTTCCA TCGCTATCGC
CACTTCCCCA GCCAGTTGGC GCCGGGCAAC GGGTCGATGG GCTATGGCCT GCCCGCCGCC
ATCGCCGCCA AGGTCGTCGC CCCCCGGCGG GTGGTGGTGG CCTTCGCCGG CGACGGTTGT
TTCCTGATGA ACGGTCAGGA ACTGGCGACC GCCGTCGACC AGGGGCTTGA TCCCATCATC
ATCGTCATCA ACAACGGCAT GTATGGCACC ATCCGCATGC ATCAGGAGAA GGCCTATCCC
GGCCGGGTCA GCGGCACCAG CCTGACCAAC CCGGATTTCG TCGCCCTCGC CCAGGCCTAT
GGCGCCCTGG GCTTGCGCGT GCGCCGCACG GCCGAATTCG GCCCGGCTTT TGATCAGGCC
CTGGTCGCCG GCCGTCCGGT GTTGATCGAG ATCCATCAAG ACCCCGAGGC GATCAGCCAC
CGCGTCAGCT TGACCGCCCT GCGGGAAAAG GCCTTGGCCA CCAGCGCCTG A
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| Protein sequence | MGSIGSNIQK HSRGVCAVVQ SSVASRTGGA LLADSLIALG ADTVYCVPGE SFLPFLDAVH
DRTDALRLVV CRQEGGASYM ADAHAKMTGK PGVCFVTRGP GACNAAIGVH TAFQDCTPML
LFIGQVDRPM IGREAFQEVD MTAFFAPLAK FSATADSAAR LPELVARAWA AATSGRPGPA
VVALPEDVLA EMAFARDPLP RPPARPAPRA ADMADLASRL AAAERPLVIV GGGTWTPRAA
KLVTTWAEAS GLPVVAAFRR QDVVDNLSPV YIGELGFSAS PRLNARIKAA DLIVCVGDRL
GEVTTQGYSL IESPVPSQSL IHIFPDAGEI GRVYATDLGI VSAMEPFAEM LSPVDGRHWA
GWLAQGRADY AANLRADPCP GSVDMAQVMA EIEARLPEDA VITNGAGNYS GWVHRFHRYR
HFPSQLAPGN GSMGYGLPAA IAAKVVAPRR VVVAFAGDGC FLMNGQELAT AVDQGLDPII
IVINNGMYGT IRMHQEKAYP GRVSGTSLTN PDFVALAQAY GALGLRVRRT AEFGPAFDQA
LVAGRPVLIE IHQDPEAISH RVSLTALREK ALATSA
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