Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0175 |
Symbol | |
ID | 3834153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 206319 |
End bp | 209081 |
Gene Length | 2763 bp |
Protein Length | 920 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637824253 |
Product | CRISPR-associated helicase Cas3 family protein protein |
Protein accession | YP_425267 |
Protein GI | 83591515 |
COG category | [R] General function prediction only |
COG ID | [COG1203] Predicted helicases |
TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCAAAGC CCCTGGCGAC GCCCCTGGTC GCCACGGCCG TGAGCCCGCG CTGGCCCGAT CCCTATCGGA AAACCGATCT GATGACCCTC CCGCGTTGGA TTTTAGGCTA TTGGGGAAAG GCGCGCCCCG CCCGCGCCGA TGGCCCGGCG TGGCATCCCC TGGCCTATCA CGGCTTGGAT GTCGCCGCGG CGATGGCCGC TCTTCTGGAT CTTCGGCCGG CGCTTCTCAA CGCCATCGCC CGGGCGGCCG GCCTTTCGCC GCAAGACGCC CGGCGGGCGC TGATTCTGCT GGCCGCCTTT CACGATCTGG GGAAATTCGC CGAGAATTTC CAACAGAAGG TCGAAATTCC CGGGATCATT CCGGCGGCGC CGGGGGTCAT CGGGTCGAGC CAAAGGGGGC ATGGCGGCGT TGGGCTTCGG TTGTGGGAAA CGGCCGTCCA AGCGGGGCCA GCGCCGCTAA GCGTCATCGC CGCTCGGCTT GGCCAATGGA TCGACGCCGC CTTTGGTCAC CACGGCGCCC CGGTCGAGTC CAAGGGGTTT CATCTGGCCG AGGCCCTGTC CCCCGCCGCC CGGGACGACG CCCTGGCCTT TGTGAACGAC TGCCTGGGTT TCCTGCCGAT GCCCGAAGCC AGCGTCGATG GCGCCGATGA GATCTGGCAG GTCGCCGGGC TGCTGATCCT GGCCGATTGG ATCGGTTCCA ACCAAACGTG GTTTCCCTAT GCGCCGCCGG ACTCCTCGTT GGAGGCGTAC TGGCAAAAGG CGCAAGGGAA CGCCAAAGAC GCCCTGGCCA AGGCCGCCCT GCGCGAGGCG CCGATCGCCC CCGGGCTTGA TCTATCCGAT CTGATCGGCC CCCAGGCCCG GCCCTCGCCC CTGCAACGCT TCGCCGCGGC GGAAGCCCCG CCCCGCGAGC CGACGCTTTA TATCATTGAA GACCTGACCG GATCGGGCAA GACCGAGGCC GCCCTTCTGC TCGCCCATCG CCTGATGGCC GCCGGACAGG CCGAGGGGCT TTATTGGGCC CTGCCCAGCA AGGCCACCGC CAATGCCCTT TACGCGCGGC TGGCCGCCGT TTATCGGCGC CTGTTCCAGC CCGATACCGA TATTTCCCCG TGGATCGTGC TGGCCCATGG CGACCGCGAC CTGAACCCGC TGTTTGCCGA CAGCCGGCGG CCCGGGGGCG AGTATTACGG CGAGACGCGC TTGGCCGACG AGCAAAGCGC CGAGGCCCAA TGCGCCGCCT TCCTGGCCGA CGATATGAAG AAGACGTTTC TCGGCCAAAT CGGCATCGGC ACCATCGATC AGGCGCTGCT CTCGGTGCTG CCGGTGCGCC ATCAATCCCT GCGGATTTGC GCCCTGTCGC GGCGCGTTTT AGTTGTTGAC GAGGCCCATG CCTATGATGA TTACGTGCAA GCCGAGTTGG CGCGTCTTTT GGAGTTCCAC AGCGCCCTGG GCGGCAGCGC CATCGTGCTG TCGGCGACCC TGACCAAAAG CCAGCGCCGC GACCTCTGCC GACGCTATCA ACGAACCCGG GGCGGCGATT TGCCCAACGC CGGGGCGGTG AAACTGACCG AAGACGCCTT TCCCCTGGTG ACGCGGGTGA GCGCCCAAAG CCTTGTCGAA ACCCCGCAAG ACGCGGCGCG CGGCACCCGC CGCGATCTGC CATTCCGCCT GTTCTCCACC GTCGATCAGG CGCTGGAGTC GTTGATCGAC GCCGCCTCGG CCGGGCTCTG CGGCGTTTAC ATCCGCAACA CGGTCACCGA CGCCATCGCC GCGGTTCAAA GGCTGCGCGC CCTGGCCCCG CCGGGGGTCG ACGTGGCGCT GTTCCACGCC CGCTTCGCCC TGGGGGATCG GCTGGCCCAT GAAAACAACG CCCTTGGGCG TTTCGGAAAA AACAGCACGC CCGACGACCG ACGCGGCCGG ATTTTGGTGG CGACCCAGGT TGTCGAGCAA TCCTTGGATG TTGATTTCGA CGTTATGGTC ACGGACCTCT GCCCGATGGA CCTGCTGATC CAGCGCGCCG GACGGCTGCA CCGCCATGCC GACCGTCCCA GCCGCCCACC GCCGGTTCTG TCGGTGGTCG CCCCGCCGAC CGAGGGCGCC ATCACCGCCC AATGGTACGC CGCGCTGTTT CCACAGGGGC AATTCGTTTA TCGCGATGTC GGCCAACTGT GGCGAACCCT GAGCGTTCTG AAAGAGCGCG GCGGCCTGCC GCTTCTCAGC GCCTCGCCGC GCCTTCTAAT CGAGGCGGTC TTTGGCGATT CCGCCGCTCC TTTGCCCCCC ACCCTGGAAC AGCCCTCGTT CAAGGCCGAA GGCAAGCGTC AGGCAGAGCG GGCGGTTGGT TACGTGGTCA GCCTGGAGCG CTCGGCGGGC TATTCCCAAC AGGTCGACGC CTGGAAGACC GAGACCCAAG CCACCACCCG CCTGGGCGAC CAAGGCATTC GCCTGCGCCT TGCCCGTTGG CAGAAGGGCC AGTTGCGGCC CTGGTTCGAT GATCCCGATC CGTGGCGGGC TTGGCGGCTT TCCGAGGTCT CGGTACGCCG GGGCTTTGGC ACGCCGATCC CCCCCGATGC CCTGGCCGCC AAGGCGATGG CGGCGCACCA AGCGCGGTGG CCCGATCGTA GCGACCCGCC TTTGCTGGTG GCGCTGACCG CCACCGATGA TCCCGATCTT TGGGGCGCAA CCTGGAGCGA CGAGGACGAC GCGGTTCGGC GCCTGCACTA CTCCGCCAGC GAGGGATTTC AGATCGACGA AATCCTGCCT TGA
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Protein sequence | MAKPLATPLV ATAVSPRWPD PYRKTDLMTL PRWILGYWGK ARPARADGPA WHPLAYHGLD VAAAMAALLD LRPALLNAIA RAAGLSPQDA RRALILLAAF HDLGKFAENF QQKVEIPGII PAAPGVIGSS QRGHGGVGLR LWETAVQAGP APLSVIAARL GQWIDAAFGH HGAPVESKGF HLAEALSPAA RDDALAFVND CLGFLPMPEA SVDGADEIWQ VAGLLILADW IGSNQTWFPY APPDSSLEAY WQKAQGNAKD ALAKAALREA PIAPGLDLSD LIGPQARPSP LQRFAAAEAP PREPTLYIIE DLTGSGKTEA ALLLAHRLMA AGQAEGLYWA LPSKATANAL YARLAAVYRR LFQPDTDISP WIVLAHGDRD LNPLFADSRR PGGEYYGETR LADEQSAEAQ CAAFLADDMK KTFLGQIGIG TIDQALLSVL PVRHQSLRIC ALSRRVLVVD EAHAYDDYVQ AELARLLEFH SALGGSAIVL SATLTKSQRR DLCRRYQRTR GGDLPNAGAV KLTEDAFPLV TRVSAQSLVE TPQDAARGTR RDLPFRLFST VDQALESLID AASAGLCGVY IRNTVTDAIA AVQRLRALAP PGVDVALFHA RFALGDRLAH ENNALGRFGK NSTPDDRRGR ILVATQVVEQ SLDVDFDVMV TDLCPMDLLI QRAGRLHRHA DRPSRPPPVL SVVAPPTEGA ITAQWYAALF PQGQFVYRDV GQLWRTLSVL KERGGLPLLS ASPRLLIEAV FGDSAAPLPP TLEQPSFKAE GKRQAERAVG YVVSLERSAG YSQQVDAWKT ETQATTRLGD QGIRLRLARW QKGQLRPWFD DPDPWRAWRL SEVSVRRGFG TPIPPDALAA KAMAAHQARW PDRSDPPLLV ALTATDDPDL WGATWSDEDD AVRRLHYSAS EGFQIDEILP
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